RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MAPRE2Q15555 327 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 ELAVL1Q15717 326 aaKnown RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 CEBPEQ15744 281 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 UGT8Q16880 541 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 CRTC2Q53ET0 693 aaPredicted RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 TMEM205Q6UW68 189 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 MSANTD1Q6ZTZ1 278 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 PIGWQ7Z7B1 504 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 MRGPREQ86SM8 312 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 RIMKLAQ8IXN7 391 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 VPS37AQ8NEZ2 397 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 OR14A16Q8NHC5 309 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 BCAS4Q8TDM0 211 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 ANKRD9Q96BM1 317 aaPredicted RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 ZBED6CLQ96FA7 236 aaPredicted RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 ART5Q96L15 291 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 BBS4Q96RK4 519 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 CCNL2Q96S94 520 aaPredicted RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 LPAR4Q99677 370 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 DUSP26Q9BV47 211 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 ZNF385DQ9H6B1 395 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 NEUROD4Q9HD90 331 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 NECTIN3Q9NQS3 549 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 FAM120CQ9NX05 1096 aaKnown RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 TAS2R7Q9NYW3 318 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 IL17BQ9UHF5 180 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 CES1P1Q9UKY3 287 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 MRPS18BQ9Y676 258 aaKnown RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 CAPN7Q9Y6W3 813 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 SCN2AQ99250 2005 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 CCDC88CQ9P219 2028 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 CEP295Q9C0D2 2601 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 LOC102723996A0A087X1L8 192 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 A0A1W2PQ72 361 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 FAM234BA2RU67 622 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 C1QTNF9BB2RNN3 333 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 NR5A2O00482 541 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 PEX12O00623 359 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 CFLARO15519 480 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 ATP1B1P05026 303 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 IL6P05231 212 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 C1QTNF9P0C862 333 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SLC35E2P0CK97 266 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 PORP16435 677 aaPredicted RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 S100A3P33764 101 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 GALNSP34059 522 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 EIF2S3P41091 472 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 XKP51811 444 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 NCBP2P52298 156 aaKnown RBP eCLIP10.31□□□□□ -0.76
CHD4-202ENST00000430771 POLR2JP52435 117 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 UCNP55089 124 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 FOXL2P58012 376 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 RCAN2Q14206 197 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SPRED3Q2MJR0 410 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 PGS1Q32NB8 556 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 FAM174BQ3ZCQ3 159 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 ZNF385BQ569K4 471 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SFT2D3Q587I9 215 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SPANXN4Q5MJ08 99 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 ANXA8L1Q5VT79 327 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 CPZQ66K79 652 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 FAAH2Q6GMR7 532 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 ANKRD26P1Q6NSI1 321 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 PAOXQ6QHF9 649 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 LANCL3Q6ZV70 420 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 CPEB2Q7Z5Q1 589 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 ANKRD37Q7Z713 158 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 LAPTM4BQ86VI4 370 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 PROSER1Q86XN7 944 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 OR4N5Q8IXE1 308 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 GALNT12Q8IXK2 581 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SHISA5Q8N114 240 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 CPSF7Q8N684 471 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 OR7A2PQ8NGA2 310 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 OR8J2Q8NGG1 315 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 OR9I1Q8NGQ6 314 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 DAZLQ92904 295 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 CNRIP1Q96F85 164 aaPredicted RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 RBM18Q96H35 190 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 ALOXE3Q9BYJ1 711 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 NMUR2Q9GZQ4 415 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 SAR1AQ9NR31 198 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 ACSS1Q9NUB1 689 aaPredicted RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 CCDC167Q9P0B6 97 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 EXO1Q9UQ84 846 aaKnown RBP10.31□□□□□ -0.76
CHD4-202ENST00000430771 CLDN16Q9Y5I7 305 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 HS3ST3B1Q9Y662 390 aa10.31□□□□□ -0.76
CHD4-202ENST00000430771 WDFY3Q8IZQ1 3526 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 AKAP13Q12802 2813 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 CROCCQ5TZA2 2017 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 CDC14CA4D256 554 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 SAGE2PA6NJ88 616 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 GABRR3A8MPY1 467 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 MYO1GB0I1T2 1018 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 TGFBR3LH3BV60 316 aa10.3□□□□□ -0.76
CHD4-202ENST00000430771 RNASET2O00584 256 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms