RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CASP6P55212 293 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 HERVK_113P63132 956 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ERVK-8P63133 956 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 DUSP2Q05923 314 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 TFF3Q07654 80 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 TGM3Q08188 693 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ACAP2Q15057 778 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 EBPQ15125 230 aaKnown RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 HIST2H2ACQ16777 129 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 AP5B1Q2VPB7 878 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF791Q3KP31 576 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 PRAMEF20Q5VT98 475 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 HIST2H2AA3Q6FI13 130 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 MTFR2Q6P444 385 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 XKRXQ6PP77 449 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 TMEM64Q6YI46 380 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 GPR180Q86V85 440 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 RELL1Q8IUW5 271 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 TMEM151AQ8N4L1 468 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 L3MBTL4Q8NA19 623 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 SIMC1Q8NDZ2 872 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 OR8K3Q8NH51 312 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ANP32BQ92688 251 aaKnown RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 DAZLQ92904 295 aaKnown RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 SDCCAG3Q96C92 435 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 SENP5Q96HI0 755 aaPredicted RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 FBXL20Q96IG2 436 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ERVK-6Q9BXR3 956 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 IPPKQ9H8X2 491 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 TIMMDC1Q9NPL8 285 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 FARSBQ9NSD9 589 aaKnown RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 SPRR3Q9UBC9 169 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF225Q9UK10 706 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ERVK-19Q9WJR5 959 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 DTX4Q9Y2E6 619 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 FAM215AQ9Y5M1 114 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 ANKHD1Q8IWZ3 2542 aaKnown RBP10.88□□□□□ -0.67
HDAC4-202ENST00000430200 VPS13CQ709C8 3753 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SYCE1LA8MT33 242 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 KDM4EB2RXH2 506 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 KLRC4-KLRK1H3BQV0 150 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 PRRG2O14669 202 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 PGRMC2O15173 223 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 URI1O94763 535 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 MLYCDO95822 493 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 RPS17P08708 135 aaKnown RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 NR2F6P10588 404 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 ALOX15P16050 662 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 IGFBP2P18065 325 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 POU3F2P20265 443 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SERPINB1P30740 379 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SSTR4P31391 388 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 HPDP32754 393 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 RAP1GDS1P52306 607 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SLC37A1P57057 533 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 PPIAP62937 165 aaKnown RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 CKAP4Q07065 602 aaKnown RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 DUSP8Q13202 625 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SERTAD2Q14140 314 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 FAM83EQ2M2I3 478 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SPRED3Q2MJR0 410 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 TCHHL1Q5QJ38 904 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 LIPJQ5W064 366 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 BICRALQ6AI39 1079 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 RTL6Q6ICC9 239 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 LETMD1Q6P1Q0 360 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 RTL4Q6ZR62 310 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 CEP128Q6ZU80 1094 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 CHSY3Q70JA7 882 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 GDF7Q7Z4P5 450 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 CCDC71Q8IV32 467 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF441Q8N8Z8 693 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 OR10G3Q8NGC4 313 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 OR5M9Q8NGP3 310 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 UBE2E3Q969T4 207 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 RGMAQ96B86 450 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 PHF21BQ96EK2 531 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 LURAP1Q96LR2 239 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 DGAT2Q96PD7 388 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 HBEGFQ99075 208 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 TREX2Q9BQ50 279 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 CNPPD1Q9BV87 410 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 MRPL1Q9BYD6 325 aaKnown RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 ROGDIQ9GZN7 287 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 WWTR1Q9GZV5 400 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF703Q9H7S9 590 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 NOL11Q9H8H0 719 aaKnown RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 DDX31Q9H8H2 851 aaKnown RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 RNF6Q9Y252 685 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 CHCHD2Q9Y6H1 151 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-202ENST00000430200 PCNX3Q9H6A9 2034 aa10.87□□□□□ -0.67
HDAC4-202ENST00000430200 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 FAM90A27PA6NNH2 459 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 A8MT66 165 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 NPIPA2E9PIF3 369 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 NPIPA3F8WFD2 350 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 IGHG3P01860 377 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 FAM58BPP0C7Q3 252 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 COX6B1P14854 86 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms