RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	NTMT1	Q9BV86	223 aa		16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	ZBTB26	Q9HCK0	441 aa		16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	PRM3	Q9NNZ6	103 aa		16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	ZNF180	Q9UJW8	692 aa		16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	ERVK-11	Q9UQG0	969 aa		16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	ASB4	Q9Y574	426 aa		16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	INTS1	Q8N201	2190 aa	Known RBP	16.42	■□□□□ 0.22
MRPL28-203	ENST00000429738	PINLYP	A6NC86	204 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738		E9PLN8	166 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	ADAM10	O14672	748 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	TMPRSS11D	O60235	418 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	EED	O75530	441 aa	Known RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	PRKRA	O75569	313 aa	Known RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	CLDN9	O95484	217 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	CTAGE8	P0CG41	777 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	COL6A2	P12110	1019 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	COX7A2	P14406	83 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	CNTF	P26441	200 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	BUD31	P41223	144 aa	Predicted RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	FOLH1	Q04609	750 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	MPEG1	Q2M385	716 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	TSNAXIP1	Q2TAA8	658 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	DGAT2L6	Q6ZPD8	337 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	CTAGE4	Q8IX94	777 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	ST13P4	Q8IZP2	240 aa	Predicted RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	GOLM1	Q8NBJ4	401 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	OR52B6	Q8NGF0	335 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	OR52N2	Q8NGI0	321 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	NUBPL	Q8TB37	319 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	DCAKD	Q8WVC6	231 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	IFT81	Q8WYA0	676 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	ZNF592	Q92610	1267 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	PHF21B	Q96EK2	531 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	SCYL1	Q96KG9	808 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	DGAT2	Q96PD7	388 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	CDK15	Q96Q40	435 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	DMRTA2	Q96SC8	542 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	VKORC1	Q9BQB6	163 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	NOL11	Q9H8H0	719 aa	Known RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	LYAR	Q9NX58	379 aa	Known RBP	16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	XPR1	Q9UBH6	696 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	COPS7A	Q9UBW8	275 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	PCTP	Q9UKL6	214 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738	TMCO1	Q9UM00	188 aa		16.41	■□□□□ 0.22
MRPL28-203	ENST00000429738		A0A1B0GTH9	108 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	PRRG2	O14669	202 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	ALOX15	P16050	662 aa	Predicted RBP	16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	TLX1	P31314	330 aa	Predicted RBP	16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	NEK2	P51955	445 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	PLIN5	Q00G26	463 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	TRAF3	Q13114	568 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	SPRED3	Q2MJR0	410 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	PIGG	Q5H8A4	983 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	TAOK1	Q7L7X3	1001 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	C9orf40	Q8IXQ3	194 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	EID3	Q8N140	333 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	TMEM151A	Q8N4L1	468 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	OR2M7	Q8NG81	312 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	FAM57A	Q8TBR7	257 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	CA5BP1	Q8WTZ4	195 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	PPWD1	Q96BP3	646 aa	Known RBP	16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	RBM18	Q96H35	190 aa	Known RBP	16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	FBXL20	Q96IG2	436 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	SGCZ	Q96LD1	299 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738	ZDHHC11	Q9H8X9	412 aa		16.4	■□□□□ 0.22
MRPL28-203	ENST00000429738		A0A0G2JMM0	328 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738		A0A1W2PPB8	328 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738		A0A1W2PR48	441 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738		A0A1W2PRS3	328 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	WASHC1	A8K0Z3	465 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	KIR3DP1	A8MWS1	328 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	HRK	O00198	91 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	SEMA3D	O95025	777 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	GPR75	O95800	540 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	RPS17	P08708	135 aa	Known RBP	16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	SBK3	P0C264	359 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	FAM58BP	P0C7Q3	252 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	CD1E	P15812	388 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	PTGS2	P35354	604 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	CCNG1	P51959	295 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	ZNF750	Q32MQ0	723 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	GGTA1P	Q4G0N0	100 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	OPN5	Q6U736	354 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	RTL4	Q6ZR62	310 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	NUDT13	Q86X67	352 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	SREK1	Q8WXA9	508 aa	Known RBP	16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	SDCCAG3	Q96C92	435 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	ART5	Q96L15	291 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	NSUN5	Q96P11	429 aa	Known RBP	16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	SERPINI1	Q99574	410 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	SH2D2A	Q9NP31	389 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	HRH3	Q9Y5N1	445 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	IKBKG	Q9Y6K9	419 aa		16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	NIPBL	Q6KC79	2804 aa	eCLIP	16.39	■□□□□ 0.21
MRPL28-203	ENST00000429738	PHF3	Q92576	2039 aa	Known RBP	16.38	■□□□□ 0.21
MRPL28-203	ENST00000429738		A0A087WUV0	522 aa	Predicted RBP	16.38	■□□□□ 0.21
MRPL28-203	ENST00000429738	TRIM49D1	C9J1S8	452 aa		16.38	■□□□□ 0.21
MRPL28-203	ENST00000429738	POC1B-GALNT4	F8VUJ3	575 aa		16.38	■□□□□ 0.21
MRPL28-203	ENST00000429738	GLS	O94925	669 aa	Predicted RBP	16.38	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms