RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SFXN5Q8TD22 340 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 S100ZQ8WXG8 99 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PPP1R14BQ96C90 147 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 AMDHD1Q96NU7 426 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 BBS4Q96RK4 519 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 GABRG3Q99928 467 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SPATA5L1Q9BVQ7 753 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 WDR12Q9GZL7 423 aaKnown RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 HMG20AQ9NP66 347 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 TBCCD1Q9NVR7 557 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 C5AR2Q9P296 337 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SEC14L3Q9UDX4 400 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SCML1Q9UN30 329 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 B3GNT3Q9Y2A9 372 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 COLEC10Q9Y6Z7 277 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 hCG_2014768A0A024R1R8 64 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SH3D21A4FU49 640 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 K7EQS6 105 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 FAAHO00519 579 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 LATO43561 262 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ZBTB11O95625 1053 aaPredicted RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 RECKO95980 971 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 LAMP2P13473 410 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 NDUFS1P28331 727 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
THBS3-202ENST00000428962 TGM3Q08188 693 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ZNF846Q147U1 533 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ADPRMQ3LIE5 342 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 FBXO43Q4G163 708 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SZRD1Q7Z422 152 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 OR2L3Q8NG85 312 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 BBS10Q8TAM1 723 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 FGF14Q92915 247 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 RAB8BQ92930 207 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SLC38A4Q969I6 547 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 GTPBP3Q969Y2 492 aaKnown RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 MOAP1Q96BY2 351 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 SCARF2Q96GP6 870 aaPredicted RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 OR2M4Q96R27 311 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 SARGQ9BW04 601 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 KIR3DX1Q9H7L2 352 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 NMNAT1Q9HAN9 279 aaPredicted RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 SLC6A20Q9NP91 592 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ZCCHC3Q9NUD5 404 aaKnown RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 GALNT8Q9NY28 637 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PNMA8BQ9ULN7 279 aaPredicted RBP12.97□□□□□ -0.33
THBS3-202ENST00000428962 MGAT4BQ9UQ53 548 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
THBS3-202ENST00000428962 PLXND1Q9Y4D7 1925 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 DOCK8Q8NF50 2099 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 OR52A4PA6NMU1 304 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 CLDN25C9JDP6 229 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 MAN2B1O00754 1011 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 HAT1O14929 419 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
THBS3-202ENST00000428962 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
THBS3-202ENST00000428962 NR2F1P10589 423 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 CD36P16671 472 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 GABRB1P18505 474 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 HIST1H1TP22492 207 aaPredicted RBP12.96□□□□□ -0.33
THBS3-202ENST00000428962 CTSKP43235 329 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 SOX9P48436 509 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 KCNJ5P48544 419 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 KIAA1024LP59773 190 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 PUM1Q14671 1186 aaKnown RBP eCLIP12.96□□□□□ -0.33
THBS3-202ENST00000428962 RPE65Q16518 533 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 TOR1AIP1Q5JTV8 583 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 ZNF793Q6ZN11 406 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 ADCK1Q86TW2 530 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 STX19Q8N4C7 294 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 SLC15A4Q8N697 577 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 DRAXINQ8NBI3 349 aaPredicted RBP12.96□□□□□ -0.33
THBS3-202ENST00000428962 OR2L5Q8NG80 312 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 GPR32P1Q8NGA4 272 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 C9orf43Q8TAL5 461 aaPredicted RBP12.96□□□□□ -0.33
THBS3-202ENST00000428962 ASB12Q8WXK4 309 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 MS4A6EQ96DS6 147 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 VMP1Q96GC9 406 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 DHRS1Q96LJ7 313 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 MKRN2Q9H000 416 aaKnown RBP12.96□□□□□ -0.33
THBS3-202ENST00000428962 OR51I1Q9H343 314 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 GLIPR2Q9H4G4 154 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 ZNF226Q9NYT6 803 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 TRPC4Q9UBN4 977 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 FTSJ1Q9UET6 329 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 SNX7Q9UNH6 387 aa12.96□□□□□ -0.33
THBS3-202ENST00000428962 TBC1D3DA0A087WVF3 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3IA0A087WXS9 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3EA0A087X179 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3KA0A087X1G2 549 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 A0A0G2JN53 185 aa12.95□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D3FA6NER0 549 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms