RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CSF3RQ99062 836 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 NPAS2Q99743 824 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 MESP1Q9BRJ9 268 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 FAIM2Q9BWQ8 316 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 STMN4Q9H169 189 aaPredicted RBP8.51□□□□□ -1.05
SMC1A-203ENST00000428014 SEMA4BQ9NPR2 832 aaPredicted RBP8.51□□□□□ -1.05
SMC1A-203ENST00000428014 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 KLF13Q9Y2Y9 288 aaPredicted RBP8.51□□□□□ -1.05
SMC1A-203ENST00000428014 TMED5Q9Y3A6 229 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 ATG4BQ9Y4P1 393 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 ZGRF1Q86YA3 2104 aa8.51□□□□□ -1.05
SMC1A-203ENST00000428014 ANKRD33BA6NCL7 494 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 GOLGA6L10A6NI86 522 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 GABRR3A8MPY1 467 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TCP11X1B4DZS4 312 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 FAM227AF5H4B4 570 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 KLRC4-KLRK1H3BQV0 150 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TGFBR3LH3BV60 316 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 MANBAO00462 879 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TMPRSS11DO60235 418 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 NME2P1O60361 137 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TBX19O60806 448 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TRIM13O60858 407 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 BCAS2O75934 225 aaPredicted RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 MYO1DO94832 1006 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ETHE1O95571 254 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 B3GALT4O96024 378 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 SP1P08047 785 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 STSP08842 583 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 UROSP10746 265 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 NAGAP17050 411 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 DDX5P17844 614 aaKnown RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 NME2P22392 152 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 HMOX2P30519 316 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 CD96P40200 585 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 SSR4P51571 173 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TDGF1P3P51864 188 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 HNRNPFP52597 415 aaKnown RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 MAPK12P53778 367 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 MLLT10P55197 1068 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 HNRNPH2P55795 449 aaKnown RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 IFFO1Q0D2I5 559 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 RAPSNQ13702 412 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 UBAP2LQ14157 1087 aaKnown RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 HEPACAMQ14CZ8 416 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 HYAL4Q2M3T9 481 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF766Q5HY98 468 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 SLC48A1Q6P1K1 146 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 LRIG3Q6UXM1 1119 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 LINC00696Q6ZRV3 163 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 COMMD6Q7Z4G1 85 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 BEST3Q8N1M1 668 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 FAM47BQ8NA70 645 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ZFP62Q8NB50 900 aaPredicted RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TMEM52Q8NDY8 209 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 OR6Y1Q8NGX8 325 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 C16orf52Q8NHV5 167 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF675Q8TD23 568 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF721Q8TF20 911 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 CTHRC1Q96CG8 243 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 PGM2Q96G03 612 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 SENP5Q96HI0 755 aaPredicted RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 C5orf34Q96MH7 638 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 NSUN5Q96P11 429 aaKnown RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 DGAT2Q96PD7 388 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 IQCGQ9H095 443 aaKnown RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 PFDN4Q9NQP4 134 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 OLAHQ9NV23 265 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ASF1BQ9NVP2 202 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 LRFN1Q9P244 771 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 TBK1Q9UHD2 729 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF223Q9UK11 482 aaPredicted RBP8.5□□□□□ -1.05
SMC1A-203ENST00000428014 CES1P1Q9UKY3 287 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 DOPEY2Q9Y3R5 2298 aa8.5□□□□□ -1.05
SMC1A-203ENST00000428014 IGHV3-20A0A0C4DH32 117 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 A0A1B0GUH1 482 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 A0A1W2PPM1 405 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 A0A1W2PR48 441 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 ANKUB1A6NFN9 424 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TMEM200CA6NKL6 621 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TTC36A6NLP5 189 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 C17orf105B2RV13 164 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 RTCAO00442 366 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TM9SF1O15321 606 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TYROBPO43914 113 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 FGF17O60258 216 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 EEDO75530 441 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 ITGA10O75578 1167 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 SLC25A12O75746 678 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 OR4F21O95013 312 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 AIFM1O95831 613 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 PDYNP01213 254 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 UQCRHP07919 91 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CSNK2A2P19784 350 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms