RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RPS17P08708 135 aaKnown RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 SNRPAP09012 282 aaKnown RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 SBK3P0C264 359 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 TSPAN8P19075 237 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 GCAP28676 217 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 NR0B1P51843 470 aaKnown RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 HERVK_113P63132 956 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 ERVK-8P63133 956 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 PLGLB1Q02325 96 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 ASPHQ12797 758 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 FRG2Q64ET8 278 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 BNC2Q6ZN30 1099 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 RTL4Q6ZR62 310 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 DOLPP1Q86YN1 238 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 SLC34A3Q8N130 599 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 OR2M7Q8NG81 312 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 OR4F6Q8NGB9 312 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 OR52N2Q8NGI0 321 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 OR5L2Q8NGL0 311 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 RBM18Q96H35 190 aaKnown RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 PHF12Q96QT6 1004 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 FRG2BQ96QU4 278 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 MRPL57Q9BQC6 102 aaKnown RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 ERVK-6Q9BXR3 956 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 ERVK-19Q9WJR5 959 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 PHF3Q92576 2039 aaKnown RBP17.03■□□□□ 0.32
PSPC1-202ENST00000427943 A0A1W2PS29 197 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 A8MT66 165 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 PRRG2O14669 202 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 DYRK3O43781 588 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 OR10H2O60403 315 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 PDE9AO76083 593 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 IGKV3-11P04433 115 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 TPOP07202 933 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 CDSNQ15517 529 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 SGO1Q5FBB7 561 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 TEX35Q5T0J7 233 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 OPN5Q6U736 354 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 CD163Q86VB7 1156 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 ST13P4Q8IZP2 240 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-202ENST00000427943 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 C7orf57Q8NEG2 295 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 FBXL20Q96IG2 436 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 ART5Q96L15 291 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 MRPL1Q9BYD6 325 aaKnown RBP17.03■□□□□ 0.32
PSPC1-202ENST00000427943 DEFB127Q9H1M4 99 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 WDR41Q9HAD4 459 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 TEX10Q9NXF1 929 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-202ENST00000427943 PSD3Q9NYI0 1048 aa17.03■□□□□ 0.32
PSPC1-202ENST00000427943 KLF2Q9Y5W3 355 aaPredicted RBP17.03■□□□□ 0.32
PSPC1-202ENST00000427943 NINQ8N4C6 2090 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 PPP6CO00743 305 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 HNRNPRO43390 633 aaKnown RBP17.02■□□□□ 0.32
PSPC1-202ENST00000427943 SEMA3DO95025 777 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 GPR75O95800 540 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 ABHD2P08910 425 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 RHOXF2BP0C7M4 288 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 CCL3P10147 92 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 HTR1EP28566 365 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 PTGS2P35354 604 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 SMSP52788 366 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 CDH13P55290 713 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 IFT88Q13099 833 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF267Q14586 743 aaPredicted RBP17.02■□□□□ 0.32
PSPC1-202ENST00000427943 LETMD1Q6P1Q0 360 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 MILR1Q7Z6M3 343 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 IFT20Q8IY31 132 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 FAM57AQ8TBR7 257 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF483Q8TF39 744 aaPredicted RBP17.02■□□□□ 0.32
PSPC1-202ENST00000427943 GAL3ST4Q96RP7 486 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 RHOXF2Q9BQY4 288 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 PELOQ9BRX2 385 aaKnown RBP17.02■□□□□ 0.32
PSPC1-202ENST00000427943 FARSBQ9NSD9 589 aaKnown RBP17.02■□□□□ 0.32
PSPC1-202ENST00000427943 PPT2Q9UMR5 302 aa17.02■□□□□ 0.32
PSPC1-202ENST00000427943 LRBAP50851 2863 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 ACOT7O00154 380 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 PGRMC2O15173 223 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 RIPK2O43353 540 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 KLK1P06870 262 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 FREM3P0C091 2139 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 FAM153BP0C7A2 387 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 DNASE1L1P49184 302 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 PPIAP62937 165 aaKnown RBP17.01■□□□□ 0.31
PSPC1-202ENST00000427943 BIKQ13323 160 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 SPRED3Q2MJR0 410 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 FAM153CQ494X1 144 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 GGTA1PQ4G0N0 100 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 PIGGQ5H8A4 983 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 OR52E8Q6IFG1 317 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 XKRXQ6PP77 449 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 RNF111Q6ZNA4 994 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 GK5Q6ZS86 529 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 GSPT2Q8IYD1 628 aaKnown RBP17.01■□□□□ 0.31
PSPC1-202ENST00000427943 TMEM151AQ8N4L1 468 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 GOLM1Q8NBJ4 401 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 NUBPLQ8TB37 319 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 SLC22A8Q8TCC7 542 aa17.01■□□□□ 0.31
PSPC1-202ENST00000427943 FAM173AQ9BQD7 235 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms