RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 CPSF2Q9P2I0 782 aaKnown RBP18.54■□□□□ 0.56
CCDC107-206ENST00000426546 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC107-206ENST00000426546 ITGB1BP2Q9UKP3 347 aa18.54■□□□□ 0.56
CCDC107-206ENST00000426546 ATG4BQ9Y4P1 393 aa18.54■□□□□ 0.56
CCDC107-206ENST00000426546 V9GYY5 206 aaPredicted RBP18.54■□□□□ 0.56
CCDC107-206ENST00000426546 PINLYPA6NC86 204 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 KRT38O76015 456 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 CNR1P21554 472 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 PPIAP62937 165 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 PLGLB1Q02325 96 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 CPSF6Q16630 551 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 NDUFAF5Q5TEU4 345 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 C18orf63Q68DL7 685 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 MRM1Q6IN84 353 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 SLC22A16Q86VW1 577 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 OR4N5Q8IXE1 308 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 ST13P4Q8IZP2 240 aaPredicted RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 WDR20Q8TBZ3 569 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 SLC44A1Q8WWI5 657 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 SREK1Q8WXA9 508 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 ISL2Q96A47 359 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 RBM18Q96H35 190 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 FBXL20Q96IG2 436 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 PELOQ9BRX2 385 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 TTTY12Q9BZ98 90 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 VPS11Q9H270 941 aa18.53■□□□□ 0.56
CCDC107-206ENST00000426546 DDX31Q9H8H2 851 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 RYDENQ9NUL5 291 aaKnown RBP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCDC107-206ENST00000426546 PHF3Q92576 2039 aaKnown RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 A0A0A6YYD5 115 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 A0A0G2JMM0 328 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 A0A1W2PPB8 328 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 A0A1W2PRS3 328 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 KIR3DP1A8MWS1 328 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 C19orf84I3L1E1 186 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 FOXE1O00358 373 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 PROM1O43490 865 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 ZNF354AO60765 605 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 GLSO94925 669 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 SIX3O95343 332 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 INHBAP08476 426 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 ALOX15P16050 662 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 BSGP35613 385 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 MAGEA12P43365 314 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 ZNF750Q32MQ0 723 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 PIGGQ5H8A4 983 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 UBAP2Q5T6F2 1119 aaKnown RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 C9orf40Q8IXQ3 194 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 TP63Q9H3D4 680 aaPredicted RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 CDC42EP4Q9H3Q1 356 aaKnown RBP18.52■□□□□ 0.56
CCDC107-206ENST00000426546 SACM1LQ9NTJ5 587 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 COQ3Q9NZJ6 369 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 TMCO1Q9UM00 188 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 RNF11Q9Y3C5 154 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 ASB4Q9Y574 426 aa18.52■□□□□ 0.56
CCDC107-206ENST00000426546 FAM166BA8MTA8 275 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 EEDO75530 441 aaKnown RBP18.51■□□□□ 0.55
CCDC107-206ENST00000426546 PDE9AO76083 593 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 CLDN9O95484 217 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 RBP1P09455 135 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 FAM58BPP0C7Q3 252 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 NR2F6P10588 404 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 SERPINB9P50453 376 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 ASPHQ12797 758 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 SPRED3Q2MJR0 410 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 TMEM211Q6ICI0 200 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 CYP20A1Q6UW02 462 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 TAOK1Q7L7X3 1001 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 NUDT13Q86X67 352 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 PLD6Q8N2A8 252 aaKnown RBP18.51■□□□□ 0.55
CCDC107-206ENST00000426546 SLC15A4Q8N697 577 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 SLC22A8Q8TCC7 542 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 CA5BP1Q8WTZ4 195 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 PPWD1Q96BP3 646 aaKnown RBP18.51■□□□□ 0.55
CCDC107-206ENST00000426546 SDCCAG3Q96C92 435 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 DEFB127Q9H1M4 99 aa18.51■□□□□ 0.55
CCDC107-206ENST00000426546 G3V3Y1 287 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 STX16-NPEPL1H3BU86 382 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 STX16O14662 325 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 TMPRSS11DO60235 418 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 PRKRAO75569 313 aaKnown RBP18.5■□□□□ 0.55
CCDC107-206ENST00000426546 SEMA3DO95025 777 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 ACSL3O95573 720 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 GPR75O95800 540 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 IGHG3P01860 377 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 P04436 131 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 GALNSP34059 522 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 HYAL4Q2M3T9 481 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 ERCC6LQ2NKX8 1250 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 TSNAXIP1Q2TAA8 658 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 ZNF791Q3KP31 576 aaPredicted RBP18.5■□□□□ 0.55
CCDC107-206ENST00000426546 C10orf62Q5T681 223 aaPredicted RBP18.5■□□□□ 0.55
CCDC107-206ENST00000426546 DGAT2L6Q6ZPD8 337 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 FAM47EQ6ZV65 393 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 FAM109AQ8N4B1 249 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 MARVELD2Q8N4S9 558 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 PTGR2Q8N8N7 351 aaPredicted RBP18.5■□□□□ 0.55
CCDC107-206ENST00000426546 PAFAH2Q99487 392 aa18.5■□□□□ 0.55
CCDC107-206ENST00000426546 FMO2Q99518 471 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms