RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ISL2Q96A47 359 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 ANKRD9Q96BM1 317 aaPredicted RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CERS2Q96G23 380 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 Q96MF0 132 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 KRT12Q99456 494 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 PRDM14Q9GZV8 571 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 SLC17A6Q9P2U8 582 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 SLC6A5Q9Y345 797 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 OARD1Q9Y530 152 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CHCHD2Q9Y6H1 151 aaPredicted RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 SH3D21A4FU49 640 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 NCF1BA6NI72 391 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 CD8B2A6NJW9 211 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 NCF1CA8MVU1 366 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 TP53I11O14683 189 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 TBX6O95947 436 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 IL18BPO95998 194 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 FBXO45P0C2W1 286 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 TMIGD3P0DMS9 266 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 NCF1P14598 390 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 MASP1P48740 699 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 BIKQ13323 160 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 RCAN2Q14206 197 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 HIST2H2ACQ16777 129 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 AP5B1Q2VPB7 878 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 TBCELQ5QJ74 424 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 TEDDM1Q5T9Z0 273 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 VASNQ6EMK4 673 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 HIST2H2AA3Q6FI13 130 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 CCDC137Q6PK04 289 aaKnown RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 VN1R5Q7Z5H4 357 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 GALNT7Q86SF2 657 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 LUZP2Q86TE4 346 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 LRRC75A-AS1Q8N1F1 130 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 ACOT4Q8N9L9 421 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 DOK4Q8TEW6 326 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 NANOS1Q8WY41 292 aaKnown RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 WDR83Q9BRX9 315 aaKnown RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 NAT9Q9BTE0 207 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 TBCDQ9BTW9 1192 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 CALHM2Q9HA72 323 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 LZTFL1Q9NQ48 299 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 GPRC5BQ9NZH0 403 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 JKAMPQ9P055 326 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 CTNNAL1Q9UBT7 734 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 NDRG3Q9UGV2 375 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 CNOT11Q9UKZ1 510 aaKnown RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 ZNF490Q9ULM2 529 aaPredicted RBP13.43□□□□□ -0.26
PDAP1-202ENST00000426447 EML6Q6ZMW3 1958 aa13.43□□□□□ -0.26
PDAP1-202ENST00000426447 MBD3L4A6NDZ8 208 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 MBD3L3A6NE82 208 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 MBD3L5A6NJ08 208 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 CAPN14A8MX76 684 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 INAFM1C9JVW0 142 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 HRKO00198 91 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 RTCAO00442 366 aaKnown RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 FGF17O60258 216 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 TRIM3O75382 744 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 BANF1O75531 89 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 IGKV3-11P04433 115 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 ZNF37AP17032 561 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 BMP7P18075 431 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 ATP5A1P25705 553 aaKnown RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 SLC6A12P48065 614 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 PLIN5Q00G26 463 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 ZNF267Q14586 743 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 TSNQ15631 228 aaKnown RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 ADNP2Q6IQ32 1131 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 RNF111Q6ZNA4 994 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 YTHDF3Q7Z739 585 aaKnown RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 PACS2Q86VP3 889 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 TAGAPQ8N103 731 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 SNX31Q8N9S9 440 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 MBD3L2Q8NHZ7 208 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 RHBDF1Q96CC6 855 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 PTCD3Q96EY7 689 aaKnown RBP13.42□□□□□ -0.26
PDAP1-202ENST00000426447 FBXL20Q96IG2 436 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 GNRHR2Q96P88 292 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 DNAJC11Q9NVH1 559 aa13.42□□□□□ -0.26
PDAP1-202ENST00000426447 HRNRQ86YZ3 2850 aaPredicted RBP13.41□□□□□ -0.26
PDAP1-202ENST00000426447 A0A1W2PPR1 153 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 ANKRD33BA6NCL7 494 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 SH3BGRLO75368 114 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 SNX4O95219 450 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 HPNP05981 417 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 CYP4B1P13584 511 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 CDK9P50750 372 aaKnown RBP13.41□□□□□ -0.26
PDAP1-202ENST00000426447 HERVK_113P63132 956 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 ERVK-8P63133 956 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 DOC2AQ14183 400 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 NTRK2Q16620 822 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 ZNF793Q6ZN11 406 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 DGAT2L6Q6ZPD8 337 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 UBE3DQ7Z6J8 389 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 ADAMTSL2Q86TH1 951 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
PDAP1-202ENST00000426447 WDYHV1Q96HA8 205 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms