RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 FOXC2Q99958 501 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 OR8D2Q9GZM6 311 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 CXXC4Q9H2H0 198 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ELOVL6Q9H5J4 265 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 RPF2Q9H7B2 306 aaKnown RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 SEMA4BQ9NPR2 832 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 LYARQ9NX58 379 aaKnown RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 PSMC3IPQ9P2W1 217 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 COPS7AQ9UBW8 275 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 VTI1BQ9UEU0 232 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 ZNF223Q9UK11 482 aaPredicted RBP11.82□□□□□ -0.52
SGCE-203ENST00000425444 TSC22D4Q9Y3Q8 395 aa11.82□□□□□ -0.52
SGCE-203ENST00000425444 A8MT66 165 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 FOXE1O00358 373 aaPredicted RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 FGF17O60258 216 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 ETHE1O95571 254 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 RPS17P08708 135 aaKnown RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 NR2F6P10588 404 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 FOSL1P15407 271 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 GCAP28676 217 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 TRHRP34981 398 aaPredicted RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 SSR4P51571 173 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 ARFIP1P53367 373 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 HNRNPH2P55795 449 aaKnown RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 PLIN5Q00G26 463 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 IFT88Q13099 833 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 CUL3Q13618 768 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 SLC29A2Q14542 456 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 FRG2Q64ET8 278 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 C18orf63Q68DL7 685 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 ADGRD1Q6QNK2 874 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 HSDL2Q6YN16 418 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 TIFABQ6ZNK6 161 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 RPS27LQ71UM5 84 aaKnown RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 MILR1Q7Z6M3 343 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 TMEM200AQ86VY9 491 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 ACBD4Q8NC06 268 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 MORN4Q8NDC4 146 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 C7orf57Q8NEG2 295 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 OR4F6Q8NGB9 312 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 WDR20Q8TBZ3 569 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 FRMD6Q96NE9 622 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 FRG2BQ96QU4 278 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 SERPINI1Q99574 410 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 NTMT1Q9BV86 223 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 TSPAN10Q9H1Z9 355 aaPredicted RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 WDR41Q9HAD4 459 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 TNFRSF10DQ9UBN6 386 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 TBK1Q9UHD2 729 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 PPIEQ9UNP9 301 aaKnown RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 ERVK-11Q9UQG0 969 aa11.81□□□□□ -0.52
SGCE-203ENST00000425444 RPH3AQ9Y2J0 694 aaPredicted RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 HRNRQ86YZ3 2850 aaPredicted RBP11.81□□□□□ -0.52
SGCE-203ENST00000425444 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 ASPDHA6ND91 283 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 A8MVJ9 347 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 NPIPA5E9PKD4 350 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 GOLGA8RI6L899 631 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 PRKNO60260 465 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 NME2P1O60361 137 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 OR10H2O60403 315 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 PRKRAO75569 313 aaKnown RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 OR2J2O76002 312 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 OTCP00480 354 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 ZNF24P17028 368 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 TSPAN8P19075 237 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 NME2P22392 152 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 STT3AP46977 705 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 FOLH1Q04609 750 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 TRAF3Q13114 568 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 GGTA1PQ4G0N0 100 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 SGO1Q5FBB7 561 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 LCA5Q86VQ0 697 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 CNPY4Q8N129 248 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 ARMC10Q8N2F6 343 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 CPSF7Q8N684 471 aaKnown RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 SPATA3Q8NHX4 192 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 SLC2A12Q8TD20 617 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 PTPMT1Q8WUK0 201 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 ASB15Q8WXK1 588 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 TANKQ92844 425 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 ANKRD9Q96BM1 317 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 MAGED4Q96JG8 741 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 TREX2Q9BQ50 279 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 TRIM45Q9H8W5 580 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 LIN28AQ9H9Z2 209 aaKnown RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 ZBTB26Q9HCK0 441 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 DLL4Q9NR61 685 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 CCM2LQ9NUG4 571 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 HPF1Q9NWY4 346 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 NPIPA1Q9UND3 350 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 KLF13Q9Y2Y9 288 aaPredicted RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 YARS2Q9Y2Z4 477 aaKnown RBP11.8□□□□□ -0.52
SGCE-203ENST00000425444 ATG4BQ9Y4P1 393 aa11.8□□□□□ -0.52
SGCE-203ENST00000425444 A0A0A6YYD5 115 aa11.79□□□□□ -0.52
SGCE-203ENST00000425444 KIAA1324LA8MWY0 1029 aaPredicted RBP11.79□□□□□ -0.52
SGCE-203ENST00000425444 WWP2O00308 870 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms