RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 OR8J3Q8NGG0 315 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 OR5T3Q8NGG3 340 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 OR4A15Q8NGL6 344 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 MOAP1Q96BY2 351 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 PEX11GQ96HA9 241 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 LRFN5Q96NI6 719 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ANKRD27Q96NW4 1050 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ECSITQ9BQ95 431 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 GPATCH1Q9BRR8 931 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 PELOQ9BRX2 385 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 CADM1Q9BY67 442 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 TGIF2Q9GZN2 237 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 PAIP1Q9H074 479 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 NANOGQ9H9S0 305 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 C3orf14Q9HBI5 128 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 NEUROD4Q9HD90 331 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SPAG4Q9NPE6 437 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SERHLQ9NQF3 203 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 PRTFDC1Q9NRG1 225 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 SEMA3GQ9NS98 782 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 TOR4AQ9NXH8 423 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ADA2Q9NZK5 511 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 DHCR7Q9UBM7 475 aaKnown RBP9.73□□□□□ -0.85
MDC1-205ENST00000425072 TRPC4Q9UBN4 977 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 MMACHCQ9Y4U1 282 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 PCDHB14Q9Y5E9 798 aa9.73□□□□□ -0.85
MDC1-205ENST00000425072 ASPDHA6ND91 283 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 GLOD5A6NK44 160 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 FAM227AF5H4B4 570 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 MEN1O00255 615 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 CLIC1O00299 241 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 SLC30A4O14863 429 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 PLD2O14939 933 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 B4GALT2O60909 372 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 CPNE3O75131 537 aaKnown RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 DNAJB6O75190 326 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 MED26O95402 600 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 STAMBPO95630 424 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 NTRK1P04629 796 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 FHP07954 510 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 FTH1P19P0C7X4 201 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 SLC35E2P0CK97 266 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 CCL4P13236 92 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 NQO1P15559 274 aaKnown RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 ME2P23368 584 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 SLC6A2P23975 617 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 XCR1P46094 333 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 NCBP2P52298 156 aaKnown RBP eCLIP9.72□□□□□ -0.85
MDC1-205ENST00000425072 EEFSECP57772 596 aaKnown RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 SIM1P81133 766 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 TXNL4AP83876 142 aaKnown RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 SHC2P98077 582 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 SLC13A2Q13183 592 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 MAP7Q14244 749 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 NKAIN1Q4KMZ8 207 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 ZNF385BQ569K4 471 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 ARHGAP40Q5TG30 622 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 C8orf82Q6P1X6 216 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 BNC2Q6ZN30 1099 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 OVCH1Q7RTY7 1134 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 ANKRD46Q86W74 232 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 GALNT15Q8N3T1 639 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 FBXW8Q8N3Y1 598 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 FBXO27Q8NI29 283 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 PSMA8Q8TAA3 256 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 CIDECQ96AQ7 238 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 MIEF2Q96C03 454 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 CNRIP1Q96F85 164 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 ZNF681Q96N22 645 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 AMDHD1Q96NU7 426 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 DDA1Q9BW61 102 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 SLAMF8Q9P0V8 285 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 HCN3Q9P1Z3 774 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 TMEM181Q9P2C4 612 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 GPN3Q9UHW5 284 aaPredicted RBP9.72□□□□□ -0.85
MDC1-205ENST00000425072 LOXL2Q9Y4K0 774 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 PCDHGA7Q9Y5G6 932 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 PCDHGA3Q9Y5H0 932 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 GMEB1Q9Y692 573 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 MAU2Q9Y6X3 613 aa9.72□□□□□ -0.85
MDC1-205ENST00000425072 WASHC1A8K0Z3 465 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 DYRK3O43781 588 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 GMNNO75496 209 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 CIB2O75838 187 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 C6orf47O95873 294 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 GSNP06396 782 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 CYC1P08574 325 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 IFI6P09912 130 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 CPMP14384 443 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 GALNSP34059 522 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 FEN1P39748 380 aaKnown RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 CCT3P49368 545 aaKnown RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 ANXA11P50995 505 aaKnown RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 MAPK10P53779 464 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 HBA1P69905 142 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 PRR5P85299 388 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 FOLH1Q04609 750 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 VAC14Q08AM6 782 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms