RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TMEM161AQ9NX61 479 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 FKBP7Q9Y680 259 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 KCNMB2Q9Y691 235 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 PRRC2BQ5JSZ5 2229 aaKnown RBP10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 DOCK3Q8IZD9 2030 aa10.76□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF98A6NK75 572 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 DNASE1P24855 282 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 NUP62P37198 522 aaPredicted RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 CRISP1P54107 249 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 COL9A2Q14055 689 aaPredicted RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 AFTPHQ6ULP2 937 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF730Q6ZMV8 503 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ADGRG2Q8IZP9 1017 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 FTMTQ8N4E7 242 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SRFBP1Q8NEF9 429 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 DUSP18Q8NEJ0 188 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 OR8D4Q8NGM9 314 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 OR2T35Q8NGX2 323 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 MSLNLQ96KJ4 702 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SORCS2Q96PQ0 1159 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM193BQ96PV7 902 aaPredicted RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ZYG11BQ9C0D3 744 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SDHAF2Q9NX18 166 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 NUDT4Q9NZJ9 180 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 OR6C2Q9NZP2 312 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 UNC80Q8N2C7 3258 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 C2orf81A6NN90 581 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ADAM11O75078 769 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 B3GAT3O94766 335 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 POMCP01189 267 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 BPIP17213 487 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 HOXB9P17482 250 aaPredicted RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ELK1P19419 428 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 TPMTP51580 245 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 GPR85P60893 370 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 RPS7P62081 194 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SELENOWP63302 87 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 IDNKQ5T6J7 187 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 CEACAM20Q6UY09 585 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 TFAP2EQ6VUC0 442 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 USP45Q70EL2 814 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 TECPR1Q7Z6L1 1165 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 RBM45Q8IUH3 476 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 CARNMT1Q8N4J0 409 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 KCT2Q8NC54 265 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 OR7G3Q8NG95 312 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 PPP1R2P1Q96PQ5 205 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ACER3Q9NUN7 267 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 EXTL2Q9UBQ6 330 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 COPS3Q9UNS2 423 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SSNA1O43805 119 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC43A1O75387 559 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 LALBAP00709 142 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 ANXA8P13928 327 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 GPX2P18283 190 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 WNT3P56703 355 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 RPS26P62854 115 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 RAET1GQ6H3X3 334 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 NOXRED1Q6NXP6 359 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 LIMS2Q7Z4I7 341 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 HSD17B8Q92506 261 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SHARPINQ9H0F6 387 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 HCN2Q9UL51 889 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 DERAQ9Y315 318 aa10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 PDCD11Q14690 1871 aaKnown RBP10.75□□□□□ -0.69
SEC61A1-202ENST00000424880 PIKFYVEQ9Y2I7 2098 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC22A23A1A5C7 686 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 H0YC42 278 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 KHNYNO15037 678 aaKnown RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 OR10H3O60404 316 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 IFNA7P01567 189 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GLAP06280 429 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 CD3GP09693 182 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 C1SP09871 688 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 HOXB8P17481 243 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 ZP3P21754 424 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GIFP27352 417 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 STK19P49842 368 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 AP1S2P56377 157 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 C1DQ13901 141 aaKnown RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 DSG2Q14126 1118 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 GRB14Q14449 540 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 MELKQ14680 651 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PRAMEF19Q5SWL8 479 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 AFMIDQ63HM1 303 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 LAPTM4BQ86VI4 370 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 LAS2Q8IYD9 372 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 LMNTD1Q8N9Z9 388 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 VPS37AQ8NEZ2 397 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PPTC7Q8NI37 304 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 C9orf43Q8TAL5 461 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 UCN3Q969E3 161 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 WFDC6Q9BQY6 131 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 MCOLN1Q9GZU1 580 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 PIGUQ9H490 435 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 ZCCHC4Q9H5U6 513 aa10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 CUEDC1Q9NWM3 386 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-202ENST00000424880 ARL15Q9NXU5 204 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms