RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MPZP25189 248 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CHRNA5P30532 468 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 MAP2K2P36507 400 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 MMP15P51511 669 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CLCN5P51795 746 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 NUDT6P53370 316 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CDH6P55285 790 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SOX10P56693 466 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CSNK1G2P78368 415 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 BDH1Q02338 343 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 KDSRQ06136 332 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ENPEPQ07075 957 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 FOXM1Q08050 763 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PJVKQ0ZLH3 352 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GRIK2Q13002 908 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GAB1Q13480 694 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM132DQ14C87 1099 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PTPRRQ15256 657 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 P2RY14Q15391 338 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TAF13Q15543 124 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RBBP7Q16576 425 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CYP1B1Q16678 543 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ALKBH6Q3KRA9 238 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ANXA2RQ3ZCQ2 193 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SBK1Q52WX2 424 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SMUG1Q53HV7 270 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ESCO2Q56NI9 601 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SLC25A53Q5H9E4 307 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 C6orf226Q5I0X4 101 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PAGE2BQ5JRK9 111 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 EOGTQ5NDL2 527 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 LCN1P1Q5VSP4 162 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GGNBP1Q5YKI7 109 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 NCAPH2Q6IBW4 605 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CEP85Q6P2H3 762 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM220Q6QAJ8 160 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 WASH2PQ6VEQ5 465 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 LEKR1Q6ZMV7 388 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF517Q6ZMY9 492 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 DPY19L3Q6ZPD9 716 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TMPRSS11FQ6ZWK6 438 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 NLRP9Q7RTR0 991 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PTF1AQ7RTS3 328 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 LHFPL4Q7Z7J7 247 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SLC22A16Q86VW1 577 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RBM45Q8IUH3 476 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GPR65Q8IYL9 337 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 APCDD1Q8J025 514 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF444Q8N0Y2 327 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GABRG1Q8N1C3 465 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GTPBP8Q8N3Z3 284 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 C17orf78Q8N4C9 275 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PAQR4Q8N4S7 273 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SCCPDHQ8NBX0 429 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 B3GALNT2Q8NCR0 500 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ICA1LQ8NDH6 482 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 OR5T1Q8NG75 326 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 OR7G1Q8NGA0 311 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 UBA3Q8TBC4 463 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 DTX3LQ8TDB6 740 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 XAGE5Q8WWM1 108 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PIGCQ92535 297 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ELMO1Q92556 727 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GLYATL1Q969I3 302 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 COQ8BQ96D53 544 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CERS2Q96G23 380 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RBM41Q96IZ5 413 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CASD1Q96PB1 797 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TIMP4Q99727 224 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RBM4BQ9BQ04 359 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 LRRC2Q9BYS8 371 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TM6SF2Q9BZW4 377 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TM6SF1Q9BZW5 370 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ROGDIQ9GZN7 287 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 MTHFD2LQ9H903 347 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 MARCH7Q9H992 704 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 MCCC2Q9HCC0 563 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 MRPL47Q9HD33 250 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 NT5MQ9NPB1 228 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 HINT3Q9NQE9 182 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 UFSP2Q9NUQ7 469 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SMOXQ9NWM0 555 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 DLL3Q9NYJ7 618 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 EURLQ9NYK6 297 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 AHSPQ9NZD4 102 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 P2RX2Q9UBL9 471 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 NDRG3Q9UGV2 375 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 DDX19BQ9UMR2 479 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RPH3ALQ9UNE2 315 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TNNQ9UQP3 1299 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RASD1Q9Y272 281 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PPIAL4AQ9Y536 164 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 LRP12Q9Y561 859 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.44□□□□□ -1.862e-6■□□□□ 8.8
SF3B1-205ENST00000424674 SRPRBQ9Y5M8 271 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 NPTNQ9Y639 398 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CFAP65Q6ZU64 1925 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 EMSYQ7Z589 1322 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 HEG1Q9ULI3 1381 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms