RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OR52I1Q8NGK6 324 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 TMEM163Q8TC26 289 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF480Q8WV37 535 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 GLYATL1Q969I3 302 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 CIDECQ96AQ7 238 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-204ENST00000424143 TRMT61AQ96FX7 289 aaKnown RBP14.47□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF607Q96SK3 696 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 C11orf54Q9H0W9 315 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF334Q9HCZ1 680 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-204ENST00000424143 ABCB9Q9NP78 766 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 DKK3Q9UBP4 350 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 KLHL20Q9Y2M5 609 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 GSTK1Q9Y2Q3 226 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 EXOSC1Q9Y3B2 195 aaKnown RBP14.47□□□□□ -0.09
C9orf3-204ENST00000424143 SF3B6Q9Y3B4 125 aaKnown RBP14.47□□□□□ -0.09
C9orf3-204ENST00000424143 INSL5Q9Y5Q6 135 aa14.47□□□□□ -0.09
C9orf3-204ENST00000424143 SRCAPQ6ZRS2 3230 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 TRDV1A0A1B0GX56 115 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 TSPAN6O43657 245 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 GSTM3P21266 225 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 STK19P49842 368 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-204ENST00000424143 GAS1P54826 345 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 WNT4P56705 351 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 CDK5Q00535 292 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 ACSM1Q08AH1 577 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 GANABQ14697 944 aaKnown RBP14.46□□□□□ -0.09
C9orf3-204ENST00000424143 TMEM44Q2T9K0 475 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF284Q2VY69 593 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 CCNJQ5T5M9 372 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 ADNP2Q6IQ32 1131 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 MZT2BQ6NZ67 158 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 QSOX2Q6ZRP7 698 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 DPPA4Q7L190 304 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 HSD11B1LQ7Z5J1 315 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 TMPRSS11BQ86T26 416 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 LAPTM4BQ86VI4 370 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 RASGEF1AQ8N9B8 481 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 OR9A1PQ8NGU1 263 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 VANGL1Q8TAA9 524 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-204ENST00000424143 WDR48Q8TAF3 677 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 SLC38A5Q8WUX1 472 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 SLC5A11Q8WWX8 675 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 MRPS31Q92665 395 aaKnown RBP14.46□□□□□ -0.09
C9orf3-204ENST00000424143 LRIG1Q96JA1 1093 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 IL4I1Q96RQ9 567 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 NELL2Q99435 816 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 RHBGQ9H310 441 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 ZDHHC6Q9H6R6 413 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 C11orf16Q9NQ32 467 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 MRPL17Q9NRX2 175 aaKnown RBP14.46□□□□□ -0.09
C9orf3-204ENST00000424143 DNAJC27Q9NZQ0 273 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 TAAR2Q9P1P5 351 aa14.46□□□□□ -0.09
C9orf3-204ENST00000424143 A0A1W2PQL4 384 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-204ENST00000424143 SLC30A4O14863 429 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 PLA2G10O15496 165 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 NR2F6P10588 404 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 DDCP20711 480 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 POU1F1P28069 291 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 CTSOP43234 321 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-204ENST00000424143 TM4SF4P48230 202 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 GZMKP49863 264 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 ARPC4P59998 168 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 TBPL1P62380 186 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 PRKCZQ05513 592 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 TP53BP2Q13625 1128 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 CCSMST1Q4G0I0 132 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 ZMAT1Q5H9K5 638 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 TXNDC8Q6A555 127 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 CEACAM20Q6UY09 585 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 USP30Q70CQ3 517 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 PRICKLE2Q7Z3G6 844 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 CHFRQ96EP1 664 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 DIRAS2Q96HU8 199 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 QRFPRQ96P65 431 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 GTPBP2Q9BX10 602 aaKnown RBP14.45□□□□□ -0.1
C9orf3-204ENST00000424143 SLC6A16Q9GZN6 736 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 PITHD1Q9GZP4 211 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-204ENST00000424143 PPP1R3EQ9H7J1 279 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 CXorf36Q9H7Y0 433 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 TIGARQ9NQ88 270 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 RBFOX1Q9NWB1 397 aaKnown RBP14.45□□□□□ -0.1
C9orf3-204ENST00000424143 MRPL39Q9NYK5 338 aaKnown RBP14.45□□□□□ -0.1
C9orf3-204ENST00000424143 CFAP97Q9P2B7 532 aa14.45□□□□□ -0.1
C9orf3-204ENST00000424143 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TMEM202A6NGA9 273 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 NOTOA8MTQ0 251 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PRRG1O14668 218 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ARHGEF9O43307 516 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PI15O43692 258 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 OR10H3O60404 316 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TMCC2O75069 709 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 C1QBP02746 253 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ACP2P11117 423 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ALAS2P22557 587 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 GABRA5P31644 462 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 KIR2DL3P43628 341 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 BDKRB1P46663 353 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 GIPRP48546 466 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 MC1RQ01726 317 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms