RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 CDYL2Q8N8U2 506 aa20.36■□□□□ 0.85
TRAF4-204ENST00000422344 OR5L2Q8NGL0 311 aa20.36■□□□□ 0.85
TRAF4-204ENST00000422344 EPS8L3Q8TE67 593 aaKnown RBP20.36■□□□□ 0.85
TRAF4-204ENST00000422344 SREK1Q8WXA9 508 aaKnown RBP20.36■□□□□ 0.85
TRAF4-204ENST00000422344 ZNF382Q96SR6 550 aa20.36■□□□□ 0.85
TRAF4-204ENST00000422344 BRF2Q9HAW0 419 aa20.36■□□□□ 0.85
TRAF4-204ENST00000422344 FARSBQ9NSD9 589 aaKnown RBP20.36■□□□□ 0.85
TRAF4-204ENST00000422344 MYOTQ9UBF9 498 aa20.36■□□□□ 0.85
TRAF4-204ENST00000422344 KLF13Q9Y2Y9 288 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-204ENST00000422344 PRKNO60260 465 aaPredicted RBP20.35■□□□□ 0.85
TRAF4-204ENST00000422344 CDH16O75309 829 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 GUCY1B2O75343 617 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 OR2J2O76002 312 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 HMOX2P30519 316 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 CCT5P48643 541 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 SRSF11Q05519 484 aaKnown RBP20.35■□□□□ 0.85
TRAF4-204ENST00000422344 RBPJQ06330 500 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 LCP2Q13094 533 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 ST13P4Q8IZP2 240 aaPredicted RBP20.35■□□□□ 0.85
TRAF4-204ENST00000422344 ZNF321PQ8N8H1 164 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 OR8K3Q8NH51 312 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 ASB15Q8WXK1 588 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 PPWD1Q96BP3 646 aaKnown RBP20.35■□□□□ 0.85
TRAF4-204ENST00000422344 L3HYPDHQ96EM0 354 aa20.35■□□□□ 0.85
TRAF4-204ENST00000422344 LIN28AQ9H9Z2 209 aaKnown RBP20.35■□□□□ 0.85
TRAF4-204ENST00000422344 CCDC151A5D8V7 595 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 ASPDHA6ND91 283 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 A8MVJ9 347 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 FOXO6A8MYZ6 492 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 WWP2O00308 870 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 MAPK12P53778 367 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 PER3P56645 1201 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 RNF4P78317 190 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 CCDC153Q494R4 210 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 GPALPP1Q8IXQ4 340 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 METTL4Q8N3J2 472 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 CCNYL1Q8N7R7 359 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 CCDC63Q8NA47 563 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 METTL6Q8TCB7 284 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 SENP5Q96HI0 755 aaPredicted RBP20.34■□□□□ 0.85
TRAF4-204ENST00000422344 FRMD6Q96NE9 622 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 CNPPD1Q9BV87 410 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 TIMMDC1Q9NPL8 285 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.34■□□□□ 0.857e-6■■■□□ 16.5
TRAF4-204ENST00000422344 HPF1Q9NWY4 346 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 ZNF225Q9UK10 706 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 GRID1Q9ULK0 1009 aa20.34■□□□□ 0.85
TRAF4-204ENST00000422344 KLRC4-KLRK1H3BQV0 150 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 MANBAO00462 879 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 COPEO14579 308 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 LRRTM2O43300 516 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 PIK3R1P27986 724 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 HK2P52789 917 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 PKNOX1P55347 436 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 VSNL1P62760 191 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 ZYG11AQ6WRX3 759 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 C16orf47Q6ZP98 133 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-204ENST00000422344 COMMD6Q7Z4G1 85 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 ZNF227Q86WZ6 799 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 SLC34A3Q8N130 599 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 ZNF721Q8TF20 911 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 RIT1Q92963 219 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 FBXL20Q96IG2 436 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 HBEGFQ99075 208 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 TEX10Q9NXF1 929 aaPredicted RBP20.33■□□□□ 0.85
TRAF4-204ENST00000422344 EMCNQ9ULC0 261 aa20.33■□□□□ 0.85
TRAF4-204ENST00000422344 APCP25054 2843 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 A0A1B0GUH1 482 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 TLDC2A0PJX2 215 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 TMEM200CA6NKL6 621 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 WASHC1A8K0Z3 465 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 NPIPA5E9PKD4 350 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 ULK1O75385 1050 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 SLU7O95391 586 aaKnown RBP20.32■□□□□ 0.84
TRAF4-204ENST00000422344 ENO1P06733 434 aaKnown RBP20.32■□□□□ 0.84
TRAF4-204ENST00000422344 HSD3B1P14060 373 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 ZNF24P17028 368 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 HSD3B2P26439 372 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 CRHR1P34998 444 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 NAA20P61599 178 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 CSTF3Q12996 717 aaKnown RBP20.32■□□□□ 0.84
TRAF4-204ENST00000422344 ZNF267Q14586 743 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-204ENST00000422344 TCHHL1Q5QJ38 904 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-204ENST00000422344 NDUFAF5Q5TEU4 345 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 POGLUT1Q8NBL1 392 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 RDH11Q8TC12 318 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 RASL10BQ96S79 203 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 TSPAN10Q9H1Z9 355 aaPredicted RBP20.32■□□□□ 0.84
TRAF4-204ENST00000422344 VPS29Q9UBQ0 182 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 NPIPA1Q9UND3 350 aa20.32■□□□□ 0.84
TRAF4-204ENST00000422344 ZNF500O60304 480 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-204ENST00000422344 PROCP04070 461 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 STSP08842 583 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 SLC35E2P0CK97 266 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 KRT4P19013 534 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 SOX3P41225 446 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 MEOX1P50221 254 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 ERVK-8P63133 956 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 IFFO1Q0D2I5 559 aa20.31■□□□□ 0.84
TRAF4-204ENST00000422344 SPRED3Q2MJR0 410 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms