RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 GSDMAQ96QA5 445 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 SMIM14Q96QK8 99 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 WDR24Q96S15 920 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 LYSMD1Q96S90 227 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 C11orf70Q9BRQ4 267 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 UTP23Q9BRU9 249 aaKnown RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 DPCDQ9BVM2 203 aaPredicted RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 C1orf43Q9BWL3 253 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 PITPNM3Q9BZ71 974 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 WWP1Q9H0M0 922 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 SLC26A1Q9H2B4 701 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ZWILCHQ9H900 591 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 PCDH9Q9HC56 1237 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 NT5MQ9NPB1 228 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 IL1RAPL1Q9NZN1 696 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF282Q9UDV7 671 aaPredicted RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 C3orf18Q9UK00 162 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 DNAJC12Q9UKB3 198 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ACSL5Q9ULC5 683 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 RPL26L1Q9UNX3 145 aaKnown RBP4.56□□□□□ -1.68
SFXN1-202ENST00000421887 PLCL2Q9UPR0 1127 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 L3MBTL1Q9Y468 752 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 ALG6Q9Y672 507 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 SCN2AQ99250 2005 aa4.56□□□□□ -1.68
SFXN1-202ENST00000421887 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 OR2AG2A6NM03 316 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 A8MUI8 341 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ANKRD66B4E2M5 251 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TFECO14948 347 aaPredicted RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ZNHIT1O43257 154 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 CCP110O43303 1012 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 PRPSAP2O60256 369 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SMPD2O60906 423 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 WISP2O76076 250 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 MT-CYBP00156 380 aaPredicted RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 PNMA6AP0CW24 399 aaPredicted RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 UQCRC1P31930 480 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SERPINB6P35237 376 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SERPINF1P36955 418 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 NSFP46459 744 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ZFP36L2P47974 494 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 NDUFA8P51970 172 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ARFIP2P53365 341 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 DCDC1P59894 354 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 OC90Q02509 493 aaPredicted RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 KLC1Q07866 573 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 AP1B1Q10567 949 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 FOXO1Q12778 655 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 PNOCQ13519 176 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SNTB1Q13884 538 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SPARCL1Q14515 664 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 MAPKAPK3Q16644 382 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TIGD6Q17RP2 521 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 FILIP1LQ4L180 1135 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ERMARDQ5T6L9 678 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF449Q6P9G9 518 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 DCUN1D2Q6PH85 259 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 WDR59Q6PJI9 974 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TMEM220Q6QAJ8 160 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SARM1Q6SZW1 724 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SPESP1Q6UW49 350 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TMCO3Q6UWJ1 677 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 AMIGO1Q86WK6 493 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ARHGAP12Q8IWW6 846 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 PRSS58Q8IYP2 241 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 FAM71AQ8IYT1 594 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 CIARTQ8N365 385 aaPredicted RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 MPP5Q8N3R9 675 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 NPWQ8N729 165 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TTC29Q8NA56 475 aaPredicted RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 GPR26Q8NDV2 337 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 PSMF1Q92530 271 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SMARCE1Q969G3 411 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ZNF354BQ96LW1 612 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 VPS35Q96QK1 796 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TRIM51Q9BSJ1 452 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 TDRD1Q9BXT4 1180 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 GPR63Q9BZJ6 419 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 XPO4Q9C0E2 1151 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 FAM60AQ9NP50 221 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 CTSFQ9UBX1 484 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 HOOK1Q9UJC3 728 aaKnown RBP4.55□□□□□ -1.68
SFXN1-202ENST00000421887 GNPTGQ9UJJ9 305 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ZDHHC8Q9ULC8 765 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SHOC2Q9UQ13 582 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 HPSEQ9Y251 543 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 ARID1AO14497 2285 aa4.55□□□□□ -1.68
SFXN1-202ENST00000421887 SNRNP200O75643 2136 aaKnown RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 A0A1B0GTH9 108 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 FAM234BA2RU67 622 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 ASPDHA6ND91 283 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 AQP12BA6NM10 295 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 CLCA1A8K7I4 914 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 BTN3A3O00478 584 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 PHF1O43189 567 aaPredicted RBP4.54□□□□□ -1.68
SFXN1-202ENST00000421887 TJP3O95049 919 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 CALB1P05937 261 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 POLBP06746 335 aa4.54□□□□□ -1.68
SFXN1-202ENST00000421887 COX6A1P12074 109 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms