RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SOCS6O14544 535 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 EFSO43281 561 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 COX7A2P14406 83 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 DDX5P17844 614 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 NCF2P19878 526 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 XKP51811 444 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 BIKQ13323 160 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CRTC2Q53ET0 693 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 KIRREL2Q6UWL6 708 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CCDC81Q6ZN84 652 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 SAMD14Q8IZD0 417 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 MIER2Q8N344 545 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CNRIP1Q96F85 164 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 VPS50Q96JG6 964 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 IP6K3Q96PC2 410 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 PRPF18Q99633 342 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 SLC35C2Q9NQQ7 365 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 COPG1Q9Y678 874 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 LOC102723996A0A087X1L8 192 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 MYOCOSA0A1B0GUC4 107 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 A0A1W2PS29 197 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CDC14CA4D256 554 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 GABRR3A8MPY1 467 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 NKX2-8O15522 239 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 TBX19O60806 448 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 IFNA16P05015 189 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 PRKAR1AP10644 381 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CPMP14384 443 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 FEN1P39748 380 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CLNS1AP54105 237 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 OR4D2P58180 307 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 UFM1P61960 85 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 IRX1P78414 480 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 EEF1A2Q05639 463 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 SFT2D3Q587I9 215 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 CPEB2Q7Z5Q1 589 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 ST13P4Q8IZP2 240 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 LRRC25Q8N386 305 aaPredicted RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 OR7A2PQ8NGA2 310 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 RBM18Q96H35 190 aaKnown RBP16.43■□□□□ 0.22
LINC00271-201ENST00000421378 TEX37Q96LM6 180 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 DGAT2Q96PD7 388 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 ADAP2Q9NPF8 381 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 ATAD3AQ9NVI7 634 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 ZIM2Q9NZV7 527 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 ATP6V1HQ9UI12 483 aa16.43■□□□□ 0.22
LINC00271-201ENST00000421378 LOC400499M0QZD8 3231 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 IGHV3-20A0A0C4DH32 117 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 PEX12O00623 359 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 OR10H2O60403 315 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 SLC22A3O75751 556 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 FAM107AO95990 144 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 SLC35E2P0CK97 266 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 PORP16435 677 aaPredicted RBP16.42■□□□□ 0.22
LINC00271-201ENST00000421378 CSNK2A2P19784 350 aaPredicted RBP16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ITPKBP27987 946 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 STT3AP46977 705 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 MRPL19P49406 292 aaKnown RBP16.42■□□□□ 0.22
LINC00271-201ENST00000421378 UCNP55089 124 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 CDC20Q12834 499 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ATP1A4Q13733 1029 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 DPY19L1Q2PZI1 675 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ZNF750Q32MQ0 723 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ZNF385BQ569K4 471 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 CPTPQ5TA50 214 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ATP1A1-AS1Q5TC04 95 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 OR11G2Q8NGC1 345 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 TESCQ96BS2 214 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ZNF681Q96N22 645 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 CCT8L2Q96SF2 557 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 ZBTB18Q99592 522 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 LPAR4Q99677 370 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 PELOQ9BRX2 385 aaKnown RBP16.42■□□□□ 0.22
LINC00271-201ENST00000421378 CLMPQ9H6B4 373 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 PNO1Q9NRX1 252 aaKnown RBP16.42■□□□□ 0.22
LINC00271-201ENST00000421378 P4HTMQ9NXG6 502 aa16.42■□□□□ 0.22
LINC00271-201ENST00000421378 IGHV1-45A0A0A0MS14 117 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 A0A1W2PQ72 361 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 PDPK1O15530 556 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 COX6A1P12074 109 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 NTSP30990 170 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 ATP4BP51164 291 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 TMPRSS3P57727 454 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 SQLEQ14534 574 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 ELAVL1Q15717 326 aaKnown RBP16.41■□□□□ 0.22
LINC00271-201ENST00000421378 CEBPEQ15744 281 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 PRSS53Q2L4Q9 553 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 CAMKMTQ7Z624 323 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 GLB1L3Q8NCI6 653 aaPredicted RBP16.41■□□□□ 0.22
LINC00271-201ENST00000421378 OR9I1Q8NGQ6 314 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 NUDT8Q8WV74 236 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 THAP4Q8WY91 577 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 BBS4Q96RK4 519 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 CROCCQ5TZA2 2017 aa16.41■□□□□ 0.22
LINC00271-201ENST00000421378 ANKRD11Q6UB99 2663 aaPredicted RBP16.4■□□□□ 0.22
LINC00271-201ENST00000421378 NSG1A0A0A6YYJ2 146 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 SEC24DO94855 1032 aaPredicted RBP16.4■□□□□ 0.22
LINC00271-201ENST00000421378 ATP1B1P05026 303 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 LAMP1P11279 417 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 GPX3P22352 226 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms