RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FBXL19-AS1Q494R0 122 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 PRAMEF20Q5VT98 475 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 CAMKMTQ7Z624 323 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 TANKQ92844 425 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 RNASE6Q93091 150 aaKnown RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 UBE2E3Q969T4 207 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 PPWD1Q96BP3 646 aaKnown RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 MBD6Q96DN6 1003 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 TSPAN17Q96FV3 270 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 FBXL20Q96IG2 436 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 KRT12Q99456 494 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 SH3GL2Q99962 352 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 SLC6A15Q9H2J7 730 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 RPF2Q9H7B2 306 aaKnown RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 DLL4Q9NR61 685 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 MS4A12Q9NXJ0 267 aa15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 MTO1Q9Y2Z2 717 aaKnown RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 CHCHD2Q9Y6H1 151 aaPredicted RBP15.51■□□□□ 0.07
UPF3AP3-201ENST00000420996 NIPBLQ6KC79 2804 aaeCLIP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 E7ESA3 106 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 HRKO00198 91 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CCNT2O60583 730 aaKnown RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 EPPINO95925 133 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 TGFB1P01137 390 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 FBXO45P0C2W1 286 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CD1DP15813 335 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 BMP5P22003 454 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 SERPINB1P30740 379 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 DGKQP52824 942 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 ATP6V0D1P61421 351 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 PLIN5Q00G26 463 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 SLAMF1Q13291 335 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 FASTKD3Q14CZ7 662 aaKnown RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 DAZAP2Q15038 168 aaPredicted RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 OR4C11Q6IEV9 310 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 MED27Q6P2C8 311 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 DGAT2L6Q6ZPD8 337 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 LAS2Q8IYD9 372 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 LIX1Q8N485 282 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 FAM13CQ8NE31 585 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 OR10G3Q8NGC4 313 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CMTM7Q96FZ5 175 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CD244Q9BZW8 370 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CAB39LQ9H9S4 337 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 PRM3Q9NNZ6 103 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 ZNF629Q9UEG4 869 aaPredicted RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 MTRF1LQ9UGC7 380 aaKnown RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 FOXD3Q9UJU5 478 aaPredicted RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CNOT11Q9UKZ1 510 aaKnown RBP15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 CBLCQ9ULV8 474 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 ACANP16112 2415 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 MPDZO75970 2070 aa15.5■□□□□ 0.07
UPF3AP3-201ENST00000420996 ZNF469Q96JG9 3925 aaPredicted RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 ANKHD1Q8IWZ3 2542 aaKnown RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 IQANK1A0A1B0GTG1 560 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 TP73O15350 636 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 PHGDHO43175 533 aaKnown RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 SH3BGRLO75368 114 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 SEC31AO94979 1220 aaKnown RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 C1QAP02745 245 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 PCNAP12004 261 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 ALOX15P16050 662 aaPredicted RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 TLX1P31314 330 aaPredicted RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 TIMP3P35625 211 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 TRPC1P48995 793 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 ADAM8P78325 824 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 DR1Q01658 176 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 CBLBQ13191 982 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 DEPDC1Q5TB30 811 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 KHDRBS2Q5VWX1 349 aaKnown RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 SLC29A4Q7RTT9 530 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 LRRC70Q7Z2Q7 622 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 MAATS1Q7Z4T9 603 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 GPR180Q86V85 440 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 MMP21Q8N119 569 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 NAXEQ8NCW5 288 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 TNIP2Q8NFZ5 429 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 OR7G3Q8NG95 312 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 JSRP1Q96MG2 331 aaPredicted RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 DOHHQ9BU89 302 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 GSX1Q9H4S2 264 aaPredicted RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 DMRT3Q9NQL9 472 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 SMYD2Q9NRG4 433 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 PHF11Q9UIL8 331 aa15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 RPH3AQ9Y2J0 694 aaPredicted RBP15.49■□□□□ 0.07
UPF3AP3-201ENST00000420996 MAP1AP78559 2803 aaPredicted RBP15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 ANKRD33BA6NCL7 494 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 SAP18O00422 153 aaKnown RBP15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 TRIM3O75382 744 aaPredicted RBP15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 PIAS1O75925 651 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 S100BP04271 92 aaPredicted RBP15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 TCP1P17987 556 aaKnown RBP15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 GDF1P27539 372 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 TNFRSF17Q02223 184 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 PCDH1Q08174 1060 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 DUSP8Q13202 625 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 NTRK2Q16620 822 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 SPRED3Q2MJR0 410 aa15.48■□□□□ 0.07
UPF3AP3-201ENST00000420996 ACSF3Q4G176 576 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms