RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 FIBINQ8TAL6 211 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZSCAN18Q8TBC5 510 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SLC35F5Q8WV83 523 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 MITD1Q8WV92 249 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 TSEN15Q8WW01 171 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 OIT3Q8WWZ8 545 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 NANOS1Q8WY41 292 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SSH1Q8WYL5 1049 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 DLG3Q92796 817 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 RRNAD1Q96FB5 475 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PACRGQ96M98 296 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZNF599Q96NL3 588 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PKP2Q99959 881 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 HSD17B14Q9BPX1 270 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 MXRA8Q9BRK3 442 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 TTYH2Q9BSA4 534 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PCGF1Q9BSM1 259 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 GGACTQ9BVM4 153 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SPATA9Q9BWV2 254 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ROPN1BQ9BZX4 212 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ROGDIQ9GZN7 287 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ENKD1Q9H0I2 346 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SMG9Q9H0W8 520 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 C12orf65Q9H3J6 166 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 RNPEPQ9H4A4 650 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ARMT1Q9H993 441 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ROPN1Q9HAT0 212 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 IL1RAPQ9NPH3 570 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZNF302Q9NR11 478 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 NLGN3Q9NZ94 848 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SSR3Q9UNL2 185 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PLSCR5A0PG75 271 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 A6NIZ1 184 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 NR5A2O00482 541 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SOCS6O14544 535 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 LINC01565O15544 149 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 GPR39O43194 453 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 LRRTM2O43300 516 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 FADS1O60427 444 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 RAD1O60671 282 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 TRIM13O60858 407 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 CALCAP01258 141 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 C1QBP02746 253 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZNF182P17025 639 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ACADLP28330 430 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SPRP35270 261 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 LHX1P48742 406 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZNF41P51814 821 aaPredicted RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 DGKEP52429 567 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ARF6P62330 175 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 MPP2Q14168 576 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 HEPACAMQ14CZ8 416 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 MED22Q15528 200 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 MPPED2Q15777 294 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SNAPC1Q16533 368 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 EXOC3L4Q17RC7 722 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 GOLGA7BQ2TAP0 167 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 HNRNPA1L2Q32P51 320 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 BCL7AQ4VC05 210 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PAN2Q504Q3 1202 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 RNASE10Q5GAN6 216 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 FAM26FQ5R3K3 315 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 LPCAT4Q643R3 524 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 RAP1GAP2Q684P5 730 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 NAPEPLDQ6IQ20 393 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 LILRA6Q6PI73 481 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SH2D5Q6ZV89 423 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 CARM1Q86X55 608 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PROSER1Q86XN7 944 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZC3H7AQ8IWR0 971 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 DDIASQ8IXT1 998 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PRSS35Q8N3Z0 413 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 RTL3Q8N8U3 475 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 POMGNT2Q8NAT1 580 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ITFG1Q8TB96 612 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 NEK7Q8TDX7 302 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PPP1R13LQ8WUF5 828 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZCCHC14Q8WYQ9 949 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PPWD1Q96BP3 646 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 MEGF10Q96KG7 1140 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 ZNF778Q96MU6 729 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SLITRK1Q96PX8 696 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 EBNA1BP2Q99848 306 aaKnown RBP3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SEMA3CQ99985 751 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SIRT7Q9NRC8 400 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 CENPMQ9NSP4 180 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PARPBPQ9NWS1 579 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 C5AR2Q9P296 337 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 PCYOX1Q9UHG3 505 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 KLHL21Q9UJP4 597 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 SRCAPQ6ZRS2 3230 aa3.94□□□□□ -1.78
PTPN22-202ENST00000420377 A0A087WV62 115 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 hCG_1809904A0A1W2PP81 198 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 A0A1W2PPE2 198 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 RPS10-NUDT3A0A1W2PQS6 291 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 A0A1W2PR64 198 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 LNP1A1A4G5 178 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 PRAMEF27A3QJZ7 478 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 DUXAA6NLW8 204 aa3.93□□□□□ -1.78
PTPN22-202ENST00000420377 GABRR3A8MPY1 467 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms