RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CSF3RQ99062 836 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MAPKAP1Q9BPZ7 522 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 NUDT22Q9BRQ3 303 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PELOQ9BRX2 385 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 NDC1Q9BTX1 674 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TRIM8Q9BZR9 551 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SLC7A5P2Q9GIP4 190 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 VCXQ9H320 206 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 LRRN3Q9H3W5 708 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SMOC1Q9H4F8 434 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 KAT8Q9H7Z6 458 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 YY1AP1Q9H869 796 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TPT1P8Q9HAU6 139 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CLK4Q9HAZ1 481 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 FAM60AQ9NP50 221 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TMEM9BQ9NQ34 198 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PRDM7Q9NQW5 492 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TAS2R7Q9NYW3 318 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SLAMF8Q9P0V8 285 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 HCN3Q9P1Z3 774 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 C5AR2Q9P296 337 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 NCDNQ9UBB6 729 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CD300AQ9UGN4 299 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 EXO1Q9UQ84 846 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 NAALAD2Q9Y3Q0 740 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ATG4BQ9Y4P1 393 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ASB4Q9Y574 426 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PCDHB14Q9Y5E9 798 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 U3KQA8 63 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 A0A0A6YYC8 382 aaPredicted RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 A0A1B0GX78 115 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 A0A1W2PR48 441 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 TCRBV3S1A0A5B6 114 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 HYKKA2RU49 373 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 FITM1A5D6W6 292 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 GLOD5A6NK44 160 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 C5orf58C9J3I9 102 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 H0YIG0 161 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 I3L1I5 382 aaPredicted RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 SGK494L7N484 410 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 CXCR6O00574 342 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 DSCR3O14972 297 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF749O43361 778 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 OR10H2O60403 315 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 PRAMEF10O60809 474 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 SCN2BO60939 215 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 LRP3O75074 770 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 COQ9O75208 318 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 SORBS2O94875 1100 aaKnown RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 LDOC1O95751 146 aaPredicted RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 GP1BAP07359 652 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 FHP07954 510 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 IFI6P09912 130 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 SMIM10L1P0DMW3 83 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 MYF5P13349 255 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 NELFEP18615 380 aaKnown RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 GGT1P19440 569 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 CD1CP29017 333 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 MPIP34949 423 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 FRKP42685 505 aaPredicted RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 GABRA4P48169 554 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 ERFP50548 548 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 CDK9P50750 372 aaKnown RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 ARSFP54793 590 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 OR4D2P58180 307 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 DSTNP60981 165 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 PHC1P78364 1004 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 RBBP4Q09028 425 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 TRA2AQ13595 282 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 KCNAB1Q14722 419 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 GPR19Q15760 415 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 TUSC1Q2TAM9 212 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 FAM214AQ32MH5 1076 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 LRRC23Q53EV4 343 aaPredicted RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 PHF19Q5T6S3 580 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 ARHGAP40Q5TG30 622 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 IRAK1BP1Q5VVH5 260 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 CPZQ66K79 652 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 C18orf63Q68DL7 685 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 FBXO42Q6P3S6 717 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 DGLUCYQ7Z3D6 616 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 CALHM3Q86XJ0 350 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 PDSS2Q86YH6 399 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 NAXDQ8IW45 347 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 CA13Q8N1Q1 262 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 DTWD1Q8N5C7 304 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 OR9A4Q8NGU2 314 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 OR10A6Q8NH74 314 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 OR5AK3PQ8NH89 298 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 NUDT8Q8WV74 236 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 PYDC1Q8WXC3 89 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 KLHL6Q8WZ60 621 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 FIG4Q92562 907 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 NEURL3Q96EH8 262 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 SMIM10Q96HG1 83 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 AMDHD1Q96NU7 426 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 DPH2Q9BQC3 489 aaPredicted RBP5.62□□□□□ -1.51
HMGB3-202ENST00000419110 RBCK1Q9BYM8 510 aa5.62□□□□□ -1.51
HMGB3-202ENST00000419110 PCDHAC1Q9H158 963 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms