RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RAB3CQ96E17 227 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 JAKMIP1Q96N16 626 aaKnown RBP3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 MCCC1Q96RQ3 725 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 TNMDQ9H2S6 317 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 SP140LQ9H930 580 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 COPS7BQ9H9Q2 264 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 CCSO14618 274 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 KIAA0513O60268 411 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 SRPX2O60687 465 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 TGDSO95455 350 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 VDRP11473 427 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 TKTL1P51854 596 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 TRA2BP62995 288 aaKnown RBP3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 NDPQ00604 133 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 GABPAQ06546 454 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 EPC2Q52LR7 807 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 ANKRD23Q86SG2 305 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 CLYBLQ8N0X4 340 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 CNPY4Q8N129 248 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 SAMD12Q8N8I0 201 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 GANCQ8TET4 914 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 ULK4Q96C45 1275 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 S1PR3Q99500 378 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 DESI2Q9BSY9 194 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 RSPH9Q9H1X1 276 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 ZWILCHQ9H900 591 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 LIPT1Q9Y234 373 aa3.28□□□□□ -1.88
HMGB1P49-201ENST00000418882 TMEM129A0AVI4 362 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 FAM168BA1KXE4 195 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 SMIM30A4D0T7 59 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZNF487B1APH4 448 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 KLLNB2CW77 178 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 SAP18O00422 153 aaKnown RBP3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 LRRTM2O43300 516 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 STX6O43752 255 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 TSC22D2O75157 780 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 PIGRP01833 764 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 TCF7P36402 384 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 HEPACAMQ14CZ8 416 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 ABRAXAS2Q15018 415 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 TIMM50Q3ZCQ8 353 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 UNC50Q53HI1 259 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 PRR30Q53SZ7 412 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 KCTD11Q693B1 232 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 REP15Q6BDI9 236 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 Q6ZRG5 221 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 KCTD9Q7L273 389 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 C17orf64Q86WR6 236 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 TMEM126BQ8IUX1 230 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 CARNMT1Q8N4J0 409 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 GVQW1Q8N7I0 195 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 HAS2Q92819 552 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 MRPL53Q96EL3 112 aaKnown RBP3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZBP1Q9H171 429 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 RNPEPL1Q9HAU8 725 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 IL1RL2Q9HB29 575 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 SLC25A19Q9HC21 320 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 ABCB8Q9NUT2 735 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 Q9UF83 564 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 EXOC6BQ9Y2D4 811 aa3.27□□□□□ -1.89
HMGB1P49-201ENST00000418882 SLC15A5A6NIM6 579 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 MCF2LO15068 1137 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 SBK2P0C263 348 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 VCLP18206 1134 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 FASP25445 335 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 PPP2R1AP30153 589 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 ALDH3B1P43353 468 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 TNNT3P45378 269 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 P2RY14Q15391 338 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZNF789Q5FWF6 425 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 UTF1Q5T230 341 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 PARP8Q8N3A8 854 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 OR4L1Q8NH43 312 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 GDAP1Q8TB36 358 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 RNASE8Q8TDE3 154 aaKnown RBP3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 UBTD2Q8WUN7 234 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 TCP11Q8WWU5 503 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 CXorf58Q96LI9 332 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 GUCD1Q96NT3 240 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 DDX50Q9BQ39 737 aaKnown RBP3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 TTYH2Q9BSA4 534 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 ST6GALNAC5Q9BVH7 336 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 ABCB10Q9NRK6 738 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 CUTCQ9NTM9 273 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 TAS2R16Q9NYV7 291 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 LEF1Q9UJU2 399 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 ERVK-19Q9WJR5 959 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 ZFP37Q9Y6Q3 630 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
HMGB1P49-201ENST00000418882 C13orf42A0A1B0GVH6 325 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 FAM149AA5PLN7 773 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 CRCPO75575 148 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 UMPSP11172 480 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 TRIM23P36406 574 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 SERPINH1P50454 418 aaKnown RBP3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 HMGCS2P54868 508 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 NAAAQ02083 359 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 GIT2Q14161 759 aa3.25□□□□□ -1.89
HMGB1P49-201ENST00000418882 CRMP1Q14194 572 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms