RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 KCNK13Q9HB14 408 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 LRTM1Q9HBL6 345 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 C1orf109Q9NX04 203 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 PTGFRNQ9P2B2 879 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 TEKT2Q9UIF3 430 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 PSME2Q9UL46 239 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 RAP2CQ9Y3L5 183 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 CCL27Q9Y4X3 112 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 CLCA3PQ9Y6N3 262 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 RELNP78509 3460 aa12.47□□□□□ -0.41
TMEM248-203ENST00000418375 COL12A1Q99715 3063 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 PGRMC2O15173 223 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 OR10H2O60403 315 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 DPM1O60762 260 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 VPS4BO75351 444 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 LYPLA1O75608 230 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 SASH3O75995 380 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 ANXA4P09525 319 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 DRD2P14416 443 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 ALOX15P16050 662 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 PIK3R1P27986 724 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 STT3AP46977 705 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 IGLV3-21P80748 117 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 ZNF763Q0D2J5 394 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 BST1Q10588 318 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 HEPACAMQ14CZ8 416 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 NADK2Q4G0N4 442 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 CES4AQ5XG92 561 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 SLC48A1Q6P1K1 146 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 CLEC18BQ6UXF7 455 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 ISLR2Q6UXK2 745 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 FAM26EQ8N5C1 309 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 SLC5A8Q8N695 610 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 SIRT6Q8N6T7 355 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 CLEC18CQ8NCF0 446 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 NFAM1Q8NET5 270 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 B3GNT7Q8NFL0 401 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 CPT1CQ8TCG5 803 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 C16orf78Q8WTQ4 265 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 C11orf24Q96F05 449 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 PPP3R2Q96LZ3 170 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 LMF1Q96S06 567 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 VPS4AQ9UN37 437 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 DLGAP4Q9Y2H0 992 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
TMEM248-203ENST00000418375 TMED5Q9Y3A6 229 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 PTGDR2Q9Y5Y4 395 aa12.46□□□□□ -0.41
TMEM248-203ENST00000418375 MED13Q9UHV7 2174 aa12.46□□□□□ -0.42
TMEM248-203ENST00000418375 PTPN13Q12923 2485 aa12.46□□□□□ -0.42
TMEM248-203ENST00000418375 SPENQ96T58 3664 aaKnown RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 MYOCOSA0A1B0GUC4 107 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 A8MUI8 341 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 C17orf105B2RV13 164 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 LSM1O15116 133 aaKnown RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 SKAP2O75563 359 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 IL3P08700 152 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ALDH9A1P49189 494 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 RPL14P50914 215 aaKnown RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 CLCN2P51788 898 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 SRSF1Q07955 248 aaKnown RBP eCLIP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 MFAP5Q13361 173 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ABHD17BQ5VST6 288 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 NOXRED1Q6NXP6 359 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 Q6ZSR9 355 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ST13P4Q8IZP2 240 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ZADH2Q8N4Q0 377 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF781Q8N8C0 355 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 MORN4Q8NDC4 146 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 OR2T11Q8NH01 316 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ELP5Q8TE02 316 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 PSMF1Q92530 271 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 VMP1Q96GC9 406 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ART5Q96L15 291 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF354BQ96LW1 612 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 SORT1Q99523 831 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 ZNF395Q9H8N7 513 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 THAP1Q9NVV9 213 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 HAO1Q9UJM8 370 aa12.45□□□□□ -0.42
TMEM248-203ENST00000418375 PPIEQ9UNP9 301 aaKnown RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 POLR3HQ9Y535 204 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-203ENST00000418375 TRBV11-1A0A0K0K1C0 115 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 WASHC1A8K0Z3 465 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 SORBS2O94875 1100 aaKnown RBP12.44□□□□□ -0.42
TMEM248-203ENST00000418375 SLC35E2P0CK97 266 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 MAPK1P28482 360 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 GALNSP34059 522 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 SOX11P35716 441 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 XKP51811 444 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 RPL38P63173 70 aaKnown RBP12.44□□□□□ -0.42
TMEM248-203ENST00000418375 KIAA0040Q15053 153 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 GALNTL6Q49A17 601 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 ATP6AP1LQ52LC2 224 aa12.44□□□□□ -0.42
TMEM248-203ENST00000418375 XKR7Q5GH72 579 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms