RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 OR52N2Q8NGI0 321 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 NUBPLQ8TB37 319 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 DCAKDQ8WVC6 231 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 PELOQ9BRX2 385 aaKnown RBP23.46■■□□□ 1.35
VEGFA-208ENST00000417285 NOL11Q9H8H0 719 aaKnown RBP23.46■■□□□ 1.35
VEGFA-208ENST00000417285 DDX31Q9H8H2 851 aaKnown RBP23.46■■□□□ 1.35
VEGFA-208ENST00000417285 LYARQ9NX58 379 aaKnown RBP23.46■■□□□ 1.35
VEGFA-208ENST00000417285 RNF11Q9Y3C5 154 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 ATG4BQ9Y4P1 393 aa23.46■■□□□ 1.35
VEGFA-208ENST00000417285 ADGRG4Q8IZF6 3080 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 EXOC1LA0A1B0GW35 172 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 CCNG1P51959 295 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 TNFRSF17Q02223 184 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 ZNF750Q32MQ0 723 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 LGSNQ5TDP6 509 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 C3P1Q6ZMU1 363 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 IFT20Q8IY31 132 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 ST13P4Q8IZP2 240 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-208ENST00000417285 SLC15A4Q8N697 577 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 CA5BP1Q8WTZ4 195 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 DEFB127Q9H1M4 99 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 TP63Q9H3D4 680 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-208ENST00000417285 SACM1LQ9NTJ5 587 aa23.45■■□□□ 1.34
VEGFA-208ENST00000417285 NCOA6Q14686 2063 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-208ENST00000417285 PDE9AO76083 593 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 GPR75O95800 540 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 IGKV3-11P04433 115 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 ABHD2P08910 425 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 SNRPAP09012 282 aaKnown RBP23.44■■□□□ 1.34
VEGFA-208ENST00000417285 ALOX15P16050 662 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-208ENST00000417285 FOLH1Q04609 750 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 TBL3Q12788 808 aaKnown RBP23.44■■□□□ 1.34
VEGFA-208ENST00000417285 C10orf62Q5T681 223 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-208ENST00000417285 CYP20A1Q6UW02 462 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 WDR20Q8TBZ3 569 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 PPWD1Q96BP3 646 aaKnown RBP23.44■■□□□ 1.34
VEGFA-208ENST00000417285 FBXL20Q96IG2 436 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 MRPL57Q9BQC6 102 aaKnown RBP23.44■■□□□ 1.34
VEGFA-208ENST00000417285 ZDHHC11Q9H8X9 412 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 WDR41Q9HAD4 459 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 NFU1Q9UMS0 254 aa23.44■■□□□ 1.34
VEGFA-208ENST00000417285 FBN2P35556 2912 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 OR7A17O14581 309 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 P04436 131 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 C18orf63Q68DL7 685 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 MRM1Q6IN84 353 aaKnown RBP23.43■■□□□ 1.34
VEGFA-208ENST00000417285 CD163Q86VB7 1156 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 OR52B6Q8NGF0 335 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 SLC22A8Q8TCC7 542 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 SERPINI1Q99574 410 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 NTMT1Q9BV86 223 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 TTTY12Q9BZ98 90 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 MRPL46Q9H2W6 279 aaKnown RBP23.43■■□□□ 1.34
VEGFA-208ENST00000417285 IL1RL2Q9HB29 575 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 PCTPQ9UKL6 214 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 ASB4Q9Y574 426 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 OTOGQ6ZRI0 2925 aa23.43■■□□□ 1.34
VEGFA-208ENST00000417285 IQANK1A0A1B0GTG1 560 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 PINLYPA6NC86 204 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 GLSO94925 669 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-208ENST00000417285 FAM58BPP0C7Q3 252 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 GALNSP34059 522 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 BSGP35613 385 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 HNRNPH2P55795 449 aaKnown RBP23.42■■□□□ 1.34
VEGFA-208ENST00000417285 ASPHQ12797 758 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 FAM47EQ6ZV65 393 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 TRMT10CQ7L0Y3 403 aaKnown RBP23.42■■□□□ 1.34
VEGFA-208ENST00000417285 DND1Q8IYX4 353 aaKnown RBP23.42■■□□□ 1.34
VEGFA-208ENST00000417285 ASB5Q8WWX0 329 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 SREK1Q8WXA9 508 aaKnown RBP23.42■■□□□ 1.34
VEGFA-208ENST00000417285 SDCCAG3Q96C92 435 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 CDK15Q96Q40 435 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 SPOCK3Q9BQ16 436 aa23.42■■□□□ 1.34
VEGFA-208ENST00000417285 ZNF717Q9BY31 904 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-208ENST00000417285 A0A0A6YYD5 115 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 A0A1W2PR48 441 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 OR14I1A6ND48 311 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 EEDO75530 441 aaKnown RBP23.41■■□□□ 1.34
VEGFA-208ENST00000417285 SNRPB2P08579 225 aaKnown RBP23.41■■□□□ 1.34
VEGFA-208ENST00000417285 NEK2P51955 445 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 CDSNQ15517 529 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 HYAL4Q2M3T9 481 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 ZNF791Q3KP31 576 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-208ENST00000417285 SLC22A10Q63ZE4 541 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 TTC19Q6DKK2 380 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-208ENST00000417285 NCCRP1Q6ZVX7 275 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-208ENST00000417285 NUDT13Q86X67 352 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 RIT1Q92963 219 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 TRIM44Q96DX7 344 aaPredicted RBP23.41■■□□□ 1.34
VEGFA-208ENST00000417285 MTBPQ96DY7 904 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 AHSPQ9NZD4 102 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 HRH3Q9Y5N1 445 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 PDZD2O15018 2839 aa23.41■■□□□ 1.34
VEGFA-208ENST00000417285 FAM166BA8MTA8 275 aa23.4■■□□□ 1.34
VEGFA-208ENST00000417285 OR10H2O60403 315 aa23.4■■□□□ 1.34
VEGFA-208ENST00000417285 ZNF354AO60765 605 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-208ENST00000417285 SEMA3DO95025 777 aa23.4■■□□□ 1.34
VEGFA-208ENST00000417285 SLC35E2P0CK97 266 aa23.4■■□□□ 1.34
VEGFA-208ENST00000417285 NR2F6P10588 404 aa23.4■■□□□ 1.34
VEGFA-208ENST00000417285 SPRED3Q2MJR0 410 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms