RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SIRT6Q8N6T7 355 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 TEX19Q8NA77 164 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 OR2T11Q8NH01 316 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 ELP5Q8TE02 316 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 PTPMT1Q8WUK0 201 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 PSMF1Q92530 271 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 VMP1Q96GC9 406 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 ZNF354BQ96LW1 612 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 SORT1Q99523 831 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 C20orf27Q9GZN8 174 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 HAO1Q9UJM8 370 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 POLR3HQ9Y535 204 aaPredicted RBP21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 HELZ2Q9BYK8 2649 aaKnown RBP21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 WASHC1A8K0Z3 465 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 LSM1O15116 133 aaKnown RBP21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 SKAP2O75563 359 aaPredicted RBP21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 PDGFAP04085 211 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 IL3P08700 152 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 NR1D1P20393 614 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 GALNSP34059 522 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 XKP51811 444 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 PPP2R2AP63151 447 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 NFATC3Q12968 1075 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 MFAP5Q13361 173 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 ATP6AP1LQ52LC2 224 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 ABHD17BQ5VST6 288 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 H3F3CQ6NXT2 135 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 SAMD14Q8IZD0 417 aaPredicted RBP21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 UCN3Q969E3 161 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 ART5Q96L15 291 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 DEFB126Q9BYW3 111 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 ZNF446Q9NWS9 450 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 CES1P1Q9UKY3 287 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 ZNF780BQ9Y6R6 833 aa21.56■■□□□ 1.04
SMARCB1-205ENST00000417137 MED13Q9UHV7 2174 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 KLF11O14901 512 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 PORP16435 677 aaPredicted RBP21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 MAPK1P28482 360 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 SOX11P35716 441 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 C2orf80Q0P641 193 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 KLRB1Q12918 225 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 GALNTL6Q49A17 601 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 XKR7Q5GH72 579 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 IGFL2Q6UWQ7 119 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 IKBIPQ70UQ0 350 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 DYDC1Q8WWB3 177 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 PPWD1Q96BP3 646 aaKnown RBP21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 C19orf60Q96EN9 201 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 MYNNQ9NPC7 610 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 STMN3Q9NZ72 180 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 EHD3Q9NZN3 535 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 ABI3Q9P2A4 366 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 COPS7AQ9UBW8 275 aa21.55■■□□□ 1.04
SMARCB1-205ENST00000417137 SNNO75324 88 aaPredicted RBP21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 ERAL1O75616 437 aaKnown RBP21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 CSNK2A2P19784 350 aaPredicted RBP21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 RPL38P63173 70 aaKnown RBP21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 MEP1AQ16819 746 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 RFTN2Q52LD8 501 aaPredicted RBP21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 C6orf163Q5TEZ5 329 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 LINC00696Q6ZRV3 163 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 APCDD1LQ8NCL9 501 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 CDC26Q8NHZ8 85 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 ZNF75CPQ92670 426 aaPredicted RBP21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 RIT1Q92963 219 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 NCLNQ969V3 563 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 KLHL29Q96CT2 875 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 TUBGCP3Q96CW5 907 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 OR8D2Q9GZM6 311 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 GIMAP4Q9NUV9 329 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 UTS2RQ9UKP6 389 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 SCN2AQ99250 2005 aa21.54■■□□□ 1.04
SMARCB1-205ENST00000417137 SETXQ7Z333 2677 aaKnown RBP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 DYTNA2CJ06 578 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 ATP8B1O43520 1251 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 PEX11AO75192 247 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 CPMP14384 443 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 DDCP20711 480 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 GPR143P51810 404 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 PDCD2Q16342 344 aaPredicted RBP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 HSP90B2PQ58FF3 399 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 PTRH1Q86Y79 214 aaKnown RBP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 LGI4Q8N135 537 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 OR1N1Q8NGS0 311 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 SLC2A12Q8TD20 617 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 SENP5Q96HI0 755 aaPredicted RBP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 FCRL1Q96LA6 429 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 MIEF1Q9NQG6 463 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 INTS9Q9NV88 658 aaKnown RBP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 HEY2Q9UBP5 337 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 ANAPC2Q9UJX6 822 aa21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 HEMK1Q9Y5R4 338 aaPredicted RBP21.53■■□□□ 1.04
SMARCB1-205ENST00000417137 TRBV11-1A0A0K0K1C0 115 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 ATP6AP2A0A1C7CYW4 349 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 SLCO1B7G3V0H7 640 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 VPS4BO75351 444 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 ATP6AP2O75787 350 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 ZFAND5O76080 213 aa21.52■■□□□ 1.04
SMARCB1-205ENST00000417137 PRB1P04280 392 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms