RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 WDR41Q9HAD4 459 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 SACM1LQ9NTJ5 587 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 COQ3Q9NZJ6 369 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 ASB4Q9Y574 426 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 A0A0A6YYD5 115 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 STX16-NPEPL1H3BU86 382 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 STX16O14662 325 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF354AO60765 605 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 SMIM24O75264 130 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 EEDO75530 441 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 KRT38O76015 456 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 GPR75O95800 540 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 P04436 131 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 SNRPB2P08579 225 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 FAM58BPP0C7Q3 252 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 COL6A2P12110 1019 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 ARL1P40616 181 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 NEK2P51955 445 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 CCNG1P51959 295 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 ASPHQ12797 758 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 CDSNQ15517 529 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 TSNAXIP1Q2TAA8 658 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 UBAP2Q5T6F2 1119 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 FAM47EQ6ZV65 393 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 NUDT13Q86X67 352 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 SLC22A8Q8TCC7 542 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 IFT81Q8WYA0 676 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 SDCCAG3Q96C92 435 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 PHF21BQ96EK2 531 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 FBXL20Q96IG2 436 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 FMO2Q99518 471 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 NTMT1Q9BV86 223 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 TTTY12Q9BZ98 90 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 ZDHHC11Q9H8X9 412 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 IL1RL2Q9HB29 575 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF358Q9NW07 568 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 MYO9AB2RTY4 2548 aa16.27■□□□□ 0.2
PDLIM2-208ENST00000416159 IQANK1A0A1B0GTG1 560 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 A0A1W2PR48 441 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 FAM166BA8MTA8 275 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 TMPRSS11DO60235 418 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 OR10H2O60403 315 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 GLSO94925 669 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 SEMA3DO95025 777 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 NR2F6P10588 404 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 CNTFP26441 200 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 GALNSP34059 522 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 TBL3Q12788 808 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 SPRED3Q2MJR0 410 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 GLE1Q53GS7 698 aaKnown RBP16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 C10orf62Q5T681 223 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 DGAT2L6Q6ZPD8 337 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 C9orf40Q8IXQ3 194 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 CA5BP1Q8WTZ4 195 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 ZNF592Q92610 1267 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 PAFAH2Q99487 392 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 ZNF180Q9UJW8 692 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 HRH3Q9Y5N1 445 aa16.26■□□□□ 0.19
PDLIM2-208ENST00000416159 A0A0G2JMM0 328 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 A0A1W2PPB8 328 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 A0A1W2PRS3 328 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 KIR3DP1A8MWS1 328 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 G3V3Y1 287 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 C19orf84I3L1E1 186 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 OR7A17O14581 309 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 PRKRAO75569 313 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 CTAGE8P0CG41 777 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 HERVK_113P63132 956 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 ERVK-8P63133 956 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 ZNF267Q14586 743 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 HYAL4Q2M3T9 481 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 ZNF791Q3KP31 576 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 SLC22A10Q63ZE4 541 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 FRG2Q64ET8 278 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 TTC19Q6DKK2 380 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 SLC29A4Q7RTT9 530 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 CTAGE4Q8IX94 777 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 DND1Q8IYX4 353 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 FAM109AQ8N4B1 249 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 NOA1Q8NC60 698 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 OR52B6Q8NGF0 335 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 ASB5Q8WWX0 329 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 RIT1Q92963 219 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 CDK15Q96Q40 435 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 FRG2BQ96QU4 278 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 MRPL57Q9BQC6 102 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 CNPPD1Q9BV87 410 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 ERVK-6Q9BXR3 956 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 AHSPQ9NZD4 102 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 XPR1Q9UBH6 696 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 PCTPQ9UKL6 214 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 ERVK-19Q9WJR5 959 aa16.25■□□□□ 0.19
PDLIM2-208ENST00000416159 A0A087WUV0 522 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 OR14I1A6ND48 311 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 GLOD5A6NK44 160 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 OR6C76A6NM76 312 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 POC1B-GALNT4F8VUJ3 575 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 HRKO00198 91 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms