RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 B3GALT4O96024 378 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ATP1B2P14415 290 aaPredicted RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 LCN1P31025 176 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ADH7P40394 386 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 NDUFA9Q16795 377 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 GDPD4Q6W3E5 623 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 Q6ZSR9 355 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 NUP54Q7Z3B4 507 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 THAP6Q8TBB0 222 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CHPT1Q8WUD6 406 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 C7orf34Q96L11 122 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF583Q96ND8 569 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CD180Q99467 661 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 RNF167Q9H6Y7 350 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 SMURF1Q9HCE7 757 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 OR2S2Q9NQN1 319 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF878C9JN71 531 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 KHNYNO15037 678 aaKnown RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 GSTM3P21266 225 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 IL12BP29460 328 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 SLC6A9P48067 706 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 C1orf189Q5VU69 101 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 NRARPQ7Z6K4 114 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CELF5Q8N6W0 485 aaKnown RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 MDGA1Q8NFP4 955 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 METTL21AQ8WXB1 218 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 UBXN10Q96LJ8 280 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 KCNK12Q9HB15 430 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 FAM120CQ9NX05 1096 aaKnown RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 KNTC1P50748 2209 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ANKRD33BA6NCL7 494 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 H7C2Y5 167 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 UPK1BO75841 260 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ARNTP27540 789 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 UQCRC1P31930 480 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 GDI2P50395 445 aaKnown RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CAV3P56539 151 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 ST3GAL3Q11203 375 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 DOC2AQ14183 400 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CCDC58Q4VC31 144 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 LRRC70Q7Z2Q7 622 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 KREMEN2Q8NCW0 462 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 NCSTNQ92542 709 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 GTF2H4Q92759 462 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 DOHHQ9BU89 302 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CD300AQ9UGN4 299 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 SH2B3Q9UQQ2 575 aa12.36□□□□□ -0.43
SCN1B-202ENST00000415950 CD8B2A6NJW9 211 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 E7EQ34 232 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 RENP00797 406 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 CD8BP10966 210 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 RBM34P42696 430 aaKnown RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 DPY19L3Q6ZPD9 716 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MSANTD1Q6ZTZ1 278 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 B3GNT8Q7Z7M8 397 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 RASGEF1AQ8N9B8 481 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 C17orf62Q9BQA9 187 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 SLC29A3Q9BZD2 475 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 TMEM98Q9Y2Y6 226 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PCDHGB7Q9Y5F8 929 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PLD2O14939 933 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MUSKO15146 869 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 RAB36O95755 333 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 GSRP00390 522 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 LAG3P18627 525 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 DNASE1P24855 282 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 GALNT1Q10472 559 aaPredicted RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF630Q2M218 657 aaPredicted RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 ADPRMQ3LIE5 342 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 REEP3Q6NUK4 255 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PAPD5Q8NDF8 572 aaKnown RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 LRR1Q96L50 414 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 SECISBP2Q96T21 854 aaKnown RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 RHNO1Q9BSD3 238 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 POT1Q9NUX5 634 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 ERVW-1Q9UQF0 538 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF860A6NHJ4 632 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 H7BY64 318 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 AP1G1O43747 822 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MMP20O60882 483 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 RCBTB2O95199 551 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 BMP8BP34820 402 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 CTSOP43234 321 aaPredicted RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MAP2K3P46734 347 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 LEXMQ3ZCV2 418 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 EIPR1Q53HC9 387 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PRSS48Q7RTY5 328 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 BMP8AQ7Z5Y6 402 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MYLIPQ8WY64 445 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms