RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DGKGP49619 791 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LIM2P55344 173 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 WDR5P61964 334 aaKnown RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 MRPS15P82914 257 aaKnown RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 TAP2Q03519 686 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 MLLT11Q13015 90 aaPredicted RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 CDK10Q15131 360 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ZFP69Q49AA0 526 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 IER5LQ5T953 404 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 MFSD4BQ5TF39 518 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 CASP12Q6UXS9 341 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LIPIQ6XZB0 460 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 LINC00471Q8N535 108 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 FAM181AQ8N9Y4 354 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 OR9Q1Q8NGQ5 310 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 AP2M1Q96CW1 435 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ZCCHC2Q9C0B9 1178 aaKnown RBP9.31□□□□□ -0.92
CD44-206ENST00000415148 RERGLQ9H628 205 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 C11orf16Q9NQ32 467 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 MIEF1Q9NQG6 463 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 NDUFB11Q9NX14 153 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 TAAR2Q9P1P5 351 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 IL36AQ9UHA7 158 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 ACAD8Q9UKU7 415 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 SSR3Q9UNL2 185 aa9.31□□□□□ -0.92
CD44-206ENST00000415148 A0A0G2JMP0 313 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 C17orf113A0A1B0GUU1 675 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 A0A1W2PRU2 124 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 HYKKA2RU49 373 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CSO75390 466 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 SOX14O95416 240 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 IL3P08700 152 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 IL7P13232 177 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 SOAT1P35610 550 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 GSTM5P46439 218 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 RPS5P46782 204 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 RUNX1T1Q06455 604 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 COX10Q12887 443 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 HYAL2Q12891 473 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 C1DQ13901 141 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 FLYWCH1Q4VC44 716 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 PPP2R2DQ66LE6 453 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CD300LDQ6UXZ3 194 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CEACAM20Q6UY09 585 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 TMPRSS11AQ6ZMR5 421 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CCDC149Q6ZUS6 474 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 VN1R5Q7Z5H4 357 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MMP21Q8N119 569 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 KRT78Q8N1N4 520 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CELF5Q8N6W0 485 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 SLC38A5Q8WUX1 472 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 AUTS2Q8WXX7 1259 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 IRF7Q92985 503 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 ZNF354BQ96LW1 612 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CXorf36Q9H7Y0 433 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 DNAJC27Q9NZQ0 273 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MAU2Q9Y6X3 613 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MKI67P46013 3256 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 PDE4DIPQ5VU43 2346 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 PRRC2BQ5JSZ5 2229 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 TET1Q8NFU7 2136 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 SCN5AQ14524 2016 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 TRBV4-1A0A0J9YWV2 114 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 A0A0X1KG70 313 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 NEDD8-MDP1E9PL57 170 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 SAP18O00422 153 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 PLD2O14939 933 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 TGM5O43548 720 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MMP20O60882 483 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 GNRH1P01148 92 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 IL1AP01583 271 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 H1F0P07305 194 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 CHRNB1P11230 501 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 DDCP20711 480 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 ELAVL4P26378 380 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 IRS1P35568 1242 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 DDOSTP39656 456 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MMP12P39900 470 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 XKP51811 444 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 PSPHP78330 225 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 TCTN3Q6NUS6 607 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 LCTLQ6UWM7 567 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 ZNF438Q7Z4V0 828 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 SLC9B2Q86UD5 537 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 RAB43Q86YS6 212 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 TRIM48Q8IWZ4 208 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CFAP206Q8IYR0 622 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 SLC34A3Q8N130 599 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 FAM26EQ8N5C1 309 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CLDN22Q8N7P3 220 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 ZNF764Q96H86 408 aaPredicted RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 ZNF514Q96K75 400 aaPredicted RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 MRGPRX3Q96LB0 322 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 LINC00615Q96LM1 132 aaPredicted RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 SLC6A18Q96N87 628 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 WFDC6Q9BQY6 131 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 FUZQ9BT04 418 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms