RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 XPO1O14980 1071 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 LSM1O15116 133 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 GPAA1O43292 621 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CTAGE8P0CG41 777 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 LHCGRP22888 699 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ELAVL4P26378 380 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 HNRNPH1P31943 449 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 MGAT3Q09327 533 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 FOXE3Q13461 319 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 PPP1R7Q15435 360 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 STK11Q15831 433 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 LSM12Q3MHD2 195 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 WSCD1Q658N2 575 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CXCL17Q6UXB2 119 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 DLEU7Q6UYE1 221 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 FAM57BQ71RH2 274 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 C5orf24Q7Z6I8 188 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 BIVMQ86UB2 503 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CTAGE6Q86UF2 777 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ARHGEF19Q8IW93 802 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CD302Q8IX05 232 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CTAGE4Q8IX94 777 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 C7orf57Q8NEG2 295 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 OR10Q1Q8NGQ4 319 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CKAP2Q8WWK9 683 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 SLCO4A1Q96BD0 722 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 RAB3CQ96E17 227 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 P2RY11Q96G91 374 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 IL20RAQ9UHF4 553 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ACSL5Q9ULC5 683 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ZNF510Q9Y2H8 683 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 OR2W1Q9Y3N9 320 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 RNF114Q9Y508 228 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 R4GN57 208 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 NUP205Q92621 2012 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 DENND4CQ5VZ89 1909 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CEP192Q8TEP8 1941 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ZMYM2Q9UBW7 1377 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 KRTAP23-1A1A580 65 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CLEC18AA5D8T8 446 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 NDUFS8O00217 210 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CHUKO15111 745 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CASC3O15234 703 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 GOT2P00505 430 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 MED14OSP0DP75 135 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 GPD1P21695 349 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 C21orf33P30042 268 aaPredicted RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 MFAP3P55082 362 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 GPX6P59796 221 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 PPIAP62937 165 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 GRIK2Q13002 908 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 TRDNQ13061 729 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 MYBPHQ13203 477 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 SNTB2Q13425 540 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 ZC2HC1CQ53FD0 456 aaPredicted RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 CLEC18BQ6UXF7 455 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 Q71RC1 249 aaPredicted RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 ZNF367Q7RTV3 350 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ZDHHC17Q8IUH5 632 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ARFGAP1Q8N6T3 406 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CLEC18CQ8NCF0 446 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 ACER1Q8TDN7 264 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 PEX13Q92968 403 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 TSACCQ96A04 125 aaPredicted RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 MTBPQ96DY7 904 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 PGM2Q96G03 612 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 NAF1Q96HR8 494 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 RASL10BQ96S79 203 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 CITED1Q99966 193 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 LMF2Q9BU23 707 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 MMTAG2Q9BU76 263 aaKnown RBP2.37□□□□□ -2.03
MCF2-204ENST00000414978 ZFP14Q9HCL3 533 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 SPAG4Q9NPE6 437 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 GKN1Q9NS71 199 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 NYAP2Q9P242 653 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 TSC22D4Q9Y3Q8 395 aa2.37□□□□□ -2.03
MCF2-204ENST00000414978 TP53BP1Q12888 1972 aaPredicted RBP2.36□□□□□ -2.03
MCF2-204ENST00000414978 MYO10Q9HD67 2058 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 TRAV6A0A075B6T7 132 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 A0A0G2JK05 382 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.36□□□□□ -2.03
MCF2-204ENST00000414978 GRID2IPA4D2P6 1211 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 C5orf60A6NFR6 353 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 E7EWF7 191 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 PRRG2O14669 202 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 KRT86O43790 486 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 CYTIPO60759 359 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 ZNF806P0C7X5 589 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 ENO3P13929 434 aaPredicted RBP2.36□□□□□ -2.03
MCF2-204ENST00000414978 DUTP33316 252 aaKnown RBP2.36□□□□□ -2.03
MCF2-204ENST00000414978 HAND2P61296 217 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 KRT81Q14533 505 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 SQLEQ14534 574 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 PTGISQ16647 500 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 HSDL1Q3SXM5 330 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 BCL7AQ4VC05 210 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 SYT14P1Q58G82 188 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 CTR9Q6PD62 1173 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 DEFB128Q7Z7B8 93 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 PTOV1Q86YD1 416 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms