RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PLET1Q6UQ28 207 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 RPS27LQ71UM5 84 aaKnown RBP11.43□□□□□ -0.58
PTPRF-205ENST00000414879 TMEM130Q8N3G9 435 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 OR6K6Q8NGW6 343 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ITPAQ9BY32 194 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 OR51I1Q9H343 314 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 MCCC2Q9HCC0 563 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 PRSS16Q9NQE7 514 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ABCB10Q9NRK6 738 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 ASB6Q9NWX5 421 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 GRHPRQ9UBQ7 328 aa11.43□□□□□ -0.58
PTPRF-205ENST00000414879 MRPS14O60783 128 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 C1orf105O95561 183 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 KLKB1P03952 638 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 CDH11P55287 796 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 CRTC2Q53ET0 693 aaPredicted RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TNFAIP8L3Q5GJ75 292 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TCEAL6Q6IPX3 200 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 CXorf57Q6NSI4 855 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TLDC1Q6P9B6 456 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ARHGAP22Q7Z5H3 698 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 PNLDC1Q8NA58 520 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 OR52P1PQ8NH57 321 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 GRHL3Q8TE85 626 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 UBASH3BQ8TF42 649 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ECHDC3Q96DC8 303 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TPST2O60704 377 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 OR12D1P0DN82 309 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 RBMS1P29558 406 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 SLC6A8P48029 635 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 MLF2Q15773 248 aaPredicted RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 EGFLAMQ63HQ2 1017 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 SLC27A4Q6P1M0 643 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 PLEKHG7Q6ZR37 379 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 QSOX2Q6ZRP7 698 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 P4HA3Q7Z4N8 544 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 SLC25A36Q96CQ1 311 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TMEM80Q96HE8 168 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 GFM1Q96RP9 751 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TSC22D4Q9Y3Q8 395 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 PCDHGB6Q9Y5F9 930 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 H3BQ06 376 aaPredicted RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ENTPD6O75354 484 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 GATBO75879 557 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ADAP00813 363 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 GBAP04062 536 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 CCR7P32248 378 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TSFMP43897 325 aaKnown RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 KIAA1024LP59773 190 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 VBP1P61758 197 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TANGO2Q6ICL3 276 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 SERPINA11Q86U17 422 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 OR8J1Q8NGP2 316 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 OR5K2Q8NHB8 316 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 DIRAS2Q96HU8 199 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ASB16Q96NS5 453 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 CHCHD6Q9BRQ6 235 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 NUMBLQ9Y6R0 609 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 RGRP47804 291 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 SF3B4Q15427 424 aaKnown RBP eCLIP11.42□□□□□ -0.587e-8■■■□□ 18.5
PTPRF-205ENST00000414879 NDUFAF5Q5TEU4 345 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 OR5AR1Q8NGP9 310 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 TUBA1CQ9BQE3 449 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ACSS1Q9NUB1 689 aaPredicted RBP11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ING3Q9NXR8 418 aa11.42□□□□□ -0.58
PTPRF-205ENST00000414879 ADAMTSL1Q8N6G6 1762 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 H0YIV9 168 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 SLC6A11P48066 632 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 CPZQ66K79 652 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF773Q6PK81 442 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 CLEC14AQ86T13 490 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 NLRP8Q86W28 1048 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 KRTCAP2Q8N6L1 136 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 DSN1Q9H410 356 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 DIABLOQ9NR28 239 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 APOC1P02654 83 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 DCAF7P61962 342 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 PRDX1Q06830 199 aaKnown RBP11.41□□□□□ -0.58
PTPRF-205ENST00000414879 MANEAQ5SRI9 462 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 LETMD1Q6P1Q0 360 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 RAB43Q86YS6 212 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 GPALPP1Q8IXQ4 340 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 SDR16C5Q8N3Y7 309 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 HORMAD2Q8N7B1 307 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF433Q8N7K0 673 aaPredicted RBP11.41□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 OR2T33Q8NG76 320 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 ZNF420Q8TAQ5 688 aaPredicted RBP11.41□□□□□ -0.58
PTPRF-205ENST00000414879 NEK7Q8TDX7 302 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 SNRNP27Q8WVK2 155 aaKnown RBP11.41□□□□□ -0.58
PTPRF-205ENST00000414879 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
PTPRF-205ENST00000414879 COQ7Q99807 217 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 ARMC1Q9NVT9 282 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 GJE1A6NN92 205 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 SNPHO15079 494 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 ABCB7O75027 752 aa11.41□□□□□ -0.58
PTPRF-205ENST00000414879 NELFEP18615 380 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms