RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 EHD3Q9NZN3 535 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 NXT1Q9UKK6 140 aaKnown RBP12.3□□□□□ -0.44
CNOT4-204ENST00000414802 ANGPTL2Q9UKU9 493 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 TCFL5Q9UL49 500 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 FARSAQ9Y285 508 aaKnown RBP12.3□□□□□ -0.44
CNOT4-204ENST00000414802 PADI2Q9Y2J8 665 aa12.3□□□□□ -0.44
CNOT4-204ENST00000414802 IGKV3D-11A0A0A0MRZ8 115 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 BLACEA4D250 179 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ASPDHA6ND91 283 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 A8MUA0 341 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 TBX19O60806 448 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ALOX12BO75342 701 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 CPMP14384 443 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 LIFP15018 202 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 NTSP30990 170 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 S100A3P33764 101 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 KIR3DL1P43629 444 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 XKP51811 444 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 WNT3P56703 355 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 KCNK10P57789 538 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 RPS15P62841 145 aaKnown RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 EEF1A2Q05639 463 aaKnown RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 CLN3Q13286 438 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 IL10RAQ13651 578 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 RCAN2Q14206 197 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 DGAT2L6Q6ZPD8 337 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 SNX32Q86XE0 403 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 CLECL1Q8IZS7 167 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 FITM2Q8N6M3 262 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 AMER2Q8N7J2 671 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 GLB1L3Q8NCI6 653 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 OR2Y1Q8NGV0 311 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 STARD8Q92502 1023 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PPWD1Q96BP3 646 aaKnown RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 C8orf44Q96CB5 159 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 COQ8BQ96D53 544 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 SPDL1Q96EA4 605 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 LRRC37BQ96QE4 947 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 BBS4Q96RK4 519 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ALOXE3Q9BYJ1 711 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 GPN2Q9H9Y4 310 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PNO1Q9NRX1 252 aaKnown RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 GIMAP4Q9NUV9 329 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ZNF780BQ9Y6R6 833 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 LAMA5O15230 3695 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 IGHV3-20A0A0C4DH32 117 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 C21orf140B9A014 251 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PGRP06401 933 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PTPN4P29074 926 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 OTX2P32243 289 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 NCBP2P52298 156 aaKnown RBP eCLIP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 IGLV3-21P80748 117 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 HSPB3Q12988 150 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 NSDHLQ15738 373 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 DPY19L1Q2PZI1 675 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 VPS26BQ4G0F5 336 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 DNAJC14Q6Y2X3 702 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 MED25Q71SY5 747 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ZNF551Q7Z340 670 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 CAMKMTQ7Z624 323 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 CCDC116Q8IYX3 515 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 LRRC25Q8N386 305 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ADCY4Q8NFM4 1077 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 SUN3Q8TAQ9 357 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 GATA6Q92908 595 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 KIAA1143Q96AT1 154 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ZNF764Q96H86 408 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ZNF681Q96N22 645 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 BHLHE41Q9C0J9 482 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-204ENST00000414802 GLIPR2Q9H4G4 154 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 ATAD3AQ9NVI7 634 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PSME2Q9UL46 239 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 MAPRE3Q9UPY8 281 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
CNOT4-204ENST00000414802 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 DMXL2Q8TDJ6 3036 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 TCRBV16S1A1N1A0A5B0 115 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 CCDC154A6NI56 674 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 MYO1GB0I1T2 1018 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 OR10H2O60403 315 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 CPSF4O95639 269 aaKnown RBP12.28□□□□□ -0.44
CNOT4-204ENST00000414802 C6orf47O95873 294 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 IFNA16P05015 189 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 ABCB1P08183 1280 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-204ENST00000414802 PORP16435 677 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-204ENST00000414802 CSNK2A2P19784 350 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-204ENST00000414802 SRSF11Q05519 484 aaKnown RBP12.28□□□□□ -0.44
CNOT4-204ENST00000414802 SLC2A7Q6PXP3 512 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 ANKRD37Q7Z713 158 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 PLPP5Q8NEB5 264 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 OR8J2Q8NGG1 315 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 OR9A2Q8NGT5 310 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 FGF11Q92914 225 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 DGAT2Q96PD7 388 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 OR52E6Q96RD3 313 aa12.28□□□□□ -0.44
CNOT4-204ENST00000414802 SLC52A3Q9NQ40 469 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms