RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TIMMDC1Q9NPL8 285 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 DEPPQ9NTK1 212 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 COPS7AQ9UBW8 275 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 DCDC2Q9UHG0 476 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 TINAGQ9UJW2 476 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 EMCNQ9ULC0 261 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 TIMM22Q9Y584 194 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 SCN2AQ99250 2005 aa9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 FLNBO75369 2602 aaKnown RBP9.44□□□□□ -0.9
NCKIPSD-202ENST00000413374 A0A1B0GUH1 482 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 FAM166BA8MTA8 275 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 KLRC4-KLRK1H3BQV0 150 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 MANBAO00462 879 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 TFECO14948 347 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 DYRK3O43781 588 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 SLC19A2O60779 497 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ERAL1O75616 437 aaKnown RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 CT62P0C5K7 136 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZNF24P17028 368 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 NT5EP21589 574 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PIK3R1P27986 724 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 HMOX2P30519 316 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 SSTR4P31391 388 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 FEN1P39748 380 aaKnown RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ALDH9A1P49189 494 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 HTR6P50406 440 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 XKP51811 444 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ARFIP1P53367 373 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 MAPK12P53778 367 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PRKAA2P54646 552 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 IGLV3-21P80748 117 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PLIN5Q00G26 463 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PLGLB1Q02325 96 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 TBL3Q12788 808 aaKnown RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 GGTA1PQ4G0N0 100 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 KRTCAP3Q53RY4 240 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PIGGQ5H8A4 983 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 NDUFAF5Q5TEU4 345 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 TMEM64Q6YI46 380 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 C3P1Q6ZMU1 363 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 GPRIN3Q6ZVF9 776 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 NCCRP1Q6ZVX7 275 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PAGE2Q7Z2X7 111 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 MAMDC2Q7Z304 686 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 COMMD6Q7Z4G1 85 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 SPPL2CQ8IUH8 684 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 SIAH3Q8IW03 269 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 C9orf40Q8IXQ3 194 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ST13P4Q8IZP2 240 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 C1orf52Q8N6N3 182 aaKnown RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 CCDC63Q8NA47 563 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 PSD4Q8NDX1 1056 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR4K14Q8NGD5 310 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR52N2Q8NGI0 321 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ACMSDQ8TDX5 336 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 RELTQ969Z4 430 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 MAGED4Q96JG8 741 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 GAL3ST4Q96RP7 486 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 C1QTNF3Q9BXJ4 246 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 TRPS1Q9UHF7 1281 aa9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 KLF13Q9Y2Y9 288 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 V9GYY5 206 aaPredicted RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 ASH1LQ9NR48 2969 aaKnown RBP9.43□□□□□ -0.9
NCKIPSD-202ENST00000413374 A0A0G2JMM0 328 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 A0A1B0GTH9 108 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 A0A1W2PPB8 328 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 A0A1W2PRS3 328 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 SYNDIG1LA6NDD5 238 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 KIR3DP1A8MWS1 328 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 G3V2L1 256 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 SEMA3DO95025 777 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 LRATO95237 230 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 ESRRBO95718 433 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 MLYCDO95822 493 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 IGKV3-11P04433 115 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 GSTA1P08263 222 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 SLC35E2P0CK97 266 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 MYL2P10916 166 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 ESRRAP11474 423 aaPredicted RBP9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 ABOP16442 354 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 CNR1P21554 472 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 SERPINB3P29508 390 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 DEKP35659 375 aaKnown RBP9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 CA7P43166 264 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 DNASE1L1P49184 302 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 CASP6P55212 293 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 PER3P56645 1201 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 VSNL1P62760 191 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 HMGCS1Q01581 520 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 GALNT1Q10472 559 aaPredicted RBP9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 BIKQ13323 160 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 ESPL1Q14674 2120 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 RASA2Q15283 850 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR52E8Q6IFG1 317 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 RNF111Q6ZNA4 994 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 SH2D5Q6ZV89 423 aa9.42□□□□□ -0.9
NCKIPSD-202ENST00000413374 FGD2Q7Z6J4 655 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms