RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 S1PR5Q9H228 398 aa12.4□□□□□ -0.42
LITAF-203ENST00000413364 WDR26Q9H7D7 661 aa12.4□□□□□ -0.42
LITAF-203ENST00000413364 SLC35C2Q9NQQ7 365 aa12.4□□□□□ -0.42
LITAF-203ENST00000413364 TM7SF3Q9NS93 570 aa12.4□□□□□ -0.42
LITAF-203ENST00000413364 ZFR2Q9UPR6 939 aaKnown RBP12.4□□□□□ -0.42
LITAF-203ENST00000413364 CKAP5Q14008 2032 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 LINC00862A6NCI5 91 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 H0YAE9 185 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 K7EQS6 105 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 TBX1O43435 398 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 SCO1O75880 301 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 CPSF4O95639 269 aaKnown RBP12.39□□□□□ -0.43
LITAF-203ENST00000413364 ALBP02768 609 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 IDSP22304 550 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 TIE1P35590 1138 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 SEC13P55735 322 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 ZNF45Q02386 682 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 FGL2Q14314 439 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 Q5BKY6 102 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 METTL11BQ5VVY1 283 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 GPR155Q7Z3F1 870 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 OR5K2Q8NHB8 316 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.39□□□□□ -0.436e-14■■■■■ 70.6
LITAF-203ENST00000413364 MAGEE2Q8TD90 523 aaPredicted RBP12.39□□□□□ -0.43
LITAF-203ENST00000413364 SPOCK3Q9BQ16 436 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 SPNS1Q9H2V7 528 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 ENOPH1Q9UHY7 261 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 OR1A2Q9Y585 309 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 AUP1Q9Y679 476 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 PTP4A3O75365 173 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 SNAP29O95721 258 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 ECDO95905 644 aaPredicted RBP12.39□□□□□ -0.43
LITAF-203ENST00000413364 HTR1BP28222 390 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 MEF2AQ02078 507 aaPredicted RBP12.39□□□□□ -0.43
LITAF-203ENST00000413364 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 ADAM15Q13444 863 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 RIN1Q13671 783 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 CYBRD1Q53TN4 286 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 CPZQ66K79 652 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 ERICH5Q6P6B1 374 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 ZZZ3Q8IYH5 903 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 METTL4Q8N3J2 472 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 PHPT1Q9NRX4 125 aaPredicted RBP12.39□□□□□ -0.43
LITAF-203ENST00000413364 CLEC1BQ9P126 229 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 EXO1Q9UQ84 846 aaKnown RBP12.39□□□□□ -0.43
LITAF-203ENST00000413364 PCDHB11Q9Y5F2 797 aa12.39□□□□□ -0.43
LITAF-203ENST00000413364 CPNE3O75131 537 aaKnown RBP12.38□□□□□ -0.43
LITAF-203ENST00000413364 SNX4O95219 450 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 CCNDBP1O95273 360 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 KCNK5O95279 499 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 CST1P01037 141 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 TGFB1P01137 390 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 C1QCP02747 245 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 ALDH3A2P51648 485 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 ARHGDIAP52565 204 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 GABARAPL2P60520 117 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 RPS21P63220 83 aaKnown RBP12.38□□□□□ -0.43
LITAF-203ENST00000413364 LRRC74AQ0VAA2 488 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 DBPQ10586 325 aaPredicted RBP12.38□□□□□ -0.43
LITAF-203ENST00000413364 DAG1Q14118 895 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 VMACQ2NL98 169 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
LITAF-203ENST00000413364 KIAA1211LQ6NV74 962 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 FAM129CQ86XR2 697 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 TAGAPQ8N103 731 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 KRT78Q8N1N4 520 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 PGBD3Q8N328 593 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 C2orf73Q8N5S3 287 aaPredicted RBP12.38□□□□□ -0.43
LITAF-203ENST00000413364 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 ZNF740Q8NDX6 193 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 OR8K3Q8NH51 312 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 DYNC2LI1Q8TCX1 351 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 MUL1Q969V5 352 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 PYURFQ96I23 114 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 FBXL20Q96IG2 436 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 DMRTB1Q96MA1 342 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 RBM14Q96PK6 669 aaKnown RBP12.38□□□□□ -0.43
LITAF-203ENST00000413364 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 SLC6A15Q9H2J7 730 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 MMP27Q9H306 513 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 REEP4Q9H6H4 257 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 ACSL5Q9ULC5 683 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 SNX8Q9Y5X2 465 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 TRPM6Q9BX84 2022 aa12.38□□□□□ -0.43
LITAF-203ENST00000413364 RNASET2O00584 256 aaKnown RBP12.37□□□□□ -0.43
LITAF-203ENST00000413364 PAK4O96013 591 aaPredicted RBP12.37□□□□□ -0.43
LITAF-203ENST00000413364 HPRP00739 348 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 SLC35G4P0C7Q5 338 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 PPIBP23284 216 aaKnown RBP12.37□□□□□ -0.43
LITAF-203ENST00000413364 ARSFP54793 590 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 ADARB1P78563 741 aaKnown RBP12.37□□□□□ -0.43
LITAF-203ENST00000413364 FAM209BQ5JX69 171 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 TMEM65Q6PI78 240 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 CHST15Q7LFX5 561 aaPredicted RBP12.37□□□□□ -0.43
LITAF-203ENST00000413364 PAGE2Q7Z2X7 111 aa12.37□□□□□ -0.43
LITAF-203ENST00000413364 KRT77Q7Z794 578 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms