RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ZNF607Q96SK3 696 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 MED18Q9BUE0 208 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 ACOT13Q9NPJ3 140 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 RBFOX1Q9NWB1 397 aaKnown RBP8.17□□□□□ -1.1
PBRM1-209ENST00000412587 FLRT1Q9NZU1 646 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 EXTL2Q9UBQ6 330 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 NAALAD2Q9Y3Q0 740 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 PCDHGB5Q9Y5G0 923 aa8.17□□□□□ -1.1
PBRM1-209ENST00000412587 COL16A1Q07092 1604 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 MYH1P12882 1939 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 GRID2O43424 1007 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PRAMEF11O60813 436 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 BEST1O76090 585 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 KCNK2O95069 426 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 GJB5O95377 273 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 GLAP06280 429 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 RHOP08100 348 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TGM4P49221 684 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PNLIPRP1P54315 467 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 RING1Q06587 406 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 KLHL22Q53GT1 634 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 FAM182AQ5T1J6 154 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PAQR3Q6TCH7 311 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ADGRG5Q8IZF4 528 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 POMGNT2Q8NAT1 580 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 OR4Q3Q8NH05 313 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 RPL3LQ92901 407 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 DUS3LQ96G46 650 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 BACE2Q9Y5Z0 518 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 CTDSP2O14595 271 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ACOT8O14734 319 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 OR1F1O43749 312 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 SDC3O75056 442 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ENTPD6O75354 484 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 FARS2O95363 451 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 HIST1H2ABP04908 130 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 G0S2P27469 103 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 MNDAP41218 407 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TMEM81Q6P7N7 255 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TPRG1Q6ZUI0 275 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 HIST3H2AQ7L7L0 130 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 BTLAQ7Z6A9 289 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TERB2Q8NHR7 220 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 GPR151Q8TDV0 419 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 CCDC107Q8WV48 283 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 KCNJ9Q92806 393 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 HIST1H2ACQ93077 130 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ARL11Q969Q4 196 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TEFMQ96QE5 360 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 SLC38A3Q99624 504 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 CACNG6Q9BXT2 260 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 BEX1Q9HBH7 125 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 KIF25Q9UIL4 384 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 NUBP2Q9Y5Y2 271 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 UPK3BL1B0FP48 263 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TMEM233B4DJY2 109 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 UPK3BL2E5RIL1 263 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 AKR7A2O43488 359 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 GMFGO60234 142 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF432O94892 652 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 CHRM5P08912 532 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 SLC35G6P0C7Q6 338 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 BMPR1AP36894 532 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 BUD31P41223 144 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 MAN2A2P49641 1150 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PER3P56645 1201 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PITX1P78337 314 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF776Q68DI1 518 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PM20D1Q6GTS8 502 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TEX261Q6UWH6 196 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 IGDCC3Q8IVU1 814 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF615Q8N8J6 731 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 ACBD4Q8NC06 268 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 DNAJB8Q8NHS0 232 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TMEM203Q969S6 136 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 COQ8BQ96D53 544 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 C1orf74Q96LT6 269 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 PCBD2Q9H0N5 130 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TFB2MQ9H5Q4 396 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 AKTIPQ9H8T0 292 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 TBC1D17Q9HA65 648 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 LYARQ9NX58 379 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 REV1Q9UBZ9 1251 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 FARSAQ9Y285 508 aaKnown RBP8.16□□□□□ -1.1
PBRM1-209ENST00000412587 U3KQ87 197 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 KAT6AQ92794 2004 aa8.16□□□□□ -1.1
PBRM1-209ENST00000412587 GTPBP1O00178 669 aaKnown RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 OR10H3O60404 316 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 HLA-DPB1P04440 258 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ALDOBP05062 364 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ACP5P13686 325 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ITGA3P26006 1051 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 VIPR1P32241 457 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 IRF9Q00978 393 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 PROX2Q3B8N5 592 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 RFTN2Q52LD8 501 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms