RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LRTM2Q8N967 370 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 C17orf47Q8NEP4 570 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 OR6M1Q8NGM8 313 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 TMEM255BQ8WV15 326 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 TMED6Q8WW62 240 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 TANKQ92844 425 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 SCMH1Q96GD3 660 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 VSTM2LQ96N03 204 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CASD1Q96PB1 797 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 KRT12Q99456 494 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 NDUFAF3Q9BU61 184 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 NUP58Q9BVL2 599 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 RBM24Q9BX46 236 aaKnown RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 VCPKMTQ9H867 229 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ELOVL3Q9HB03 270 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 RAVER2Q9HCJ3 691 aaKnown RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 SLC52A3Q9NQ40 469 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 THEGQ9P2T0 379 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ONECUT1Q9UBC0 465 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 EPHA6Q9UF33 1036 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 SIX4Q9UIU6 781 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF490Q9ULM2 529 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 STUB1Q9UNE7 303 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 COLEC10Q9Y6Z7 277 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PDS5AQ29RF7 1337 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 A0A1W2PN81 502 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CLEC18AA5D8T8 446 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 RNF222A6NCQ9 220 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF732B4DXR9 585 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 WASH3PC4AMC7 463 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 FOXE1O00358 373 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 MID1O15344 667 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 JAK2O60674 1132 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CHRNA1P02708 482 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 F7P08709 466 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ANXA4P09525 319 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 LINC00271P0C7V0 271 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 PNMTP11086 282 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 TSPAN8P19075 237 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CHRNA7P36544 502 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 TMPOP42166 694 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 EIF3EP60228 445 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 SPAG1Q07617 926 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 EXOSC2Q13868 293 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CEACAM7Q14002 265 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 IL18Q14116 193 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 NFATC4Q14934 902 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CLPPQ16740 277 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 HKDC1Q2TB90 917 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 DCAF4L1Q3SXM0 396 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 LYPLAL1Q5VWZ2 237 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 AWAT2Q6E213 333 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CEACAM20Q6UY09 585 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 KDM7AQ6ZMT4 941 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 C9orf47Q6ZRZ4 202 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 BIVMQ86UB2 503 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CCDC60Q8IWA6 550 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ZC3H3Q8IXZ2 948 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF683Q8IZ20 524 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 RNF113BQ8IZP6 322 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 EID3Q8N140 333 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 LRRC75A-AS1Q8N1F1 130 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 IQCF1Q8N6M8 205 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CNBD1Q8NA66 436 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 COLGALT1Q8NBJ5 622 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF114Q8NC26 417 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 CLEC18CQ8NCF0 446 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 RDM1Q8NG50 284 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 OR5D13Q8NGL4 314 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 RAET1EQ8TD07 263 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 TMEM37Q8WXS4 190 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 SUSD6Q92537 303 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 P3H4Q92791 437 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ABTB1Q969K4 478 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 BPIFA2Q96DR5 249 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 NPY6RQ99463 290 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 S1PR3Q99500 378 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 AGPAT1Q99943 283 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 SIKE1Q9BRV8 207 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 WRAP53Q9BUR4 548 aaKnown RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 FAM124BQ9H5Z6 455 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF665Q9H7R5 613 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 A4GALTQ9NPC4 353 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 OLFML3Q9NRN5 406 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 OCIAD1Q9NX40 245 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 PLEK2Q9NYT0 353 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF224Q9NZL3 707 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 SEC14L3Q9UDX4 400 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 LCMT1Q9UIC8 334 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 RNF115Q9Y4L5 304 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 LRP12Q9Y561 859 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 OR1A2Q9Y585 309 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 KANK1Q14678 1352 aa4.07□□□□□ -1.76
BRCA1-204ENST00000412061 KIF7Q2M1P5 1343 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 ZCWPW2A0A1B0GU75 182 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 C5orf60A6NFR6 353 aa4.06□□□□□ -1.76
BRCA1-204ENST00000412061 YJEFN3A6XGL0 299 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms