RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 LRATO95237 230 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 EPPINO95925 133 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TGFB1P01137 390 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CCDC166P0CW27 439 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SERPINB3P29508 390 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SSR2P43308 183 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 WNT3P56703 355 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PDIA2Q13087 525 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TMEM35AQ53FP2 167 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CDKL4Q5MAI5 379 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FBXW10Q5XX13 1052 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CHSY3Q70JA7 882 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CAMKMTQ7Z624 323 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SLC35F6Q8N357 371 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FBXO36Q8NEA4 188 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 OR10G3Q8NGC4 313 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 RNASE6Q93091 150 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ART5Q96L15 291 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 GAL3ST4Q96RP7 486 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CAB39LQ9H9S4 337 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 QPCTLQ9NXS2 382 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 NSMCE4AQ9NXX6 385 aa13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CHCHD2Q9Y6H1 151 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 C15orf38-AP3S2A0A0A6YYH1 394 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 IQANK1A0A1B0GTG1 560 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 AHRRA9YTQ3 701 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 KDM4EB2RXH2 506 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PHGDHO43175 533 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PIAS1O75925 651 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SCELO95171 688 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 WISP3O95389 354 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FBXO45P0C2W1 286 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PCNAP12004 261 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CD1DP15813 335 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 EPORP19235 508 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TACR1P25103 407 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 GDF1P27539 372 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CEACAM8P31997 349 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 POU4F1Q01851 419 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DUSP8Q13202 625 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 BIKQ13323 160 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FASTKD3Q14CZ7 662 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DAZAP2Q15038 168 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 OR4D1Q15615 310 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TBCCQ15814 346 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SLC29A4Q7RTT9 530 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MAATS1Q7Z4T9 603 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TANKQ92844 425 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FBXL20Q96IG2 436 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MCMBPQ9BTE3 642 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SORBS1Q9BX66 1292 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 ZNF629Q9UEG4 869 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 MTRF1LQ9UGC7 380 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 FOXD3Q9UJU5 478 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 PTBP2Q9UKA9 531 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 CNOT11Q9UKZ1 510 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
HLA-DQB2-229ENST00000411527 TUBAL3A6NHL2 446 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CES2O00748 559 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TRAPPC6AO75865 159 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 IL2RAP01589 272 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 C1QAP02745 245 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RAF1P04049 648 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 S100BP04271 92 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ALOX15P16050 662 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TIMP3P35625 211 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CASP2P42575 452 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HERVK_113P63132 956 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ERVK-8P63133 956 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PLIN5Q00G26 463 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ZNF267Q14586 743 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 FBXL19-AS1Q494R0 122 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ACSF3Q4G176 576 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 KHDRBS2Q5VWX1 349 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TMEM198Q66K66 360 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 C18orf63Q68DL7 685 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 MED27Q6P2C8 311 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 POMZP3Q6PJE2 187 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RNF111Q6ZNA4 994 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 LACC1Q8IV20 430 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 LAS2Q8IYD9 372 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 DIO2Q92813 273 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EXT2Q93063 718 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 UBE2E3Q969T4 207 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CMTM7Q96FZ5 175 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms