RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TAS2R7Q9NYW3 318 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 FAM227AF5H4B4 570 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 FCHO1O14526 889 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 CTNSO60931 367 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 NME5P56597 212 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 SLC13A2Q13183 592 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 ERV3-1Q14264 604 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 TBR1Q16650 682 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 CPTPQ5TA50 214 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 PCSK4Q6UW60 755 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 CAMKMTQ7Z624 323 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 TICAM1Q8IUC6 712 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 KRTCAP2Q8N6L1 136 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 OR4K14Q8NGD5 310 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 DNAJB14Q8TBM8 379 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 EXTL1Q92935 676 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 KLHL29Q96CT2 875 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 LRRC37BQ96QE4 947 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 LANCL2Q9NS86 450 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 SH3BP4Q9P0V3 963 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 UTS2RQ9UKP6 389 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 ENTPD4Q9Y227 616 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 ZNF780BQ9Y6R6 833 aa15.51■□□□□ 0.07
TSPAN4-208ENST00000409531 DYTNA2CJ06 578 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 FAM234BA2RU67 622 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 GLOD5A6NK44 160 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 GABRR3A8MPY1 467 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 PCDH17O14917 1159 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 PGRMC2O15173 223 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 PRKRAO75569 313 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 CDC123O75794 336 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 GPR75O95800 540 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 IL6P05231 212 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 HEXBP07686 556 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 PRKAR1AP10644 381 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 POLR2JP52435 117 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 CDC20Q12834 499 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 STX4Q12846 297 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 SERTAD2Q14140 314 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 UGT8Q16880 541 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 LINC00303Q3SY05 128 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 AGKQ53H12 422 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 PAOXQ6QHF9 649 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 RIPOR1Q6ZS17 1223 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 SCUBE1Q8IWY4 988 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 ENDOVQ8N8Q3 282 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 SLC39A7Q92504 469 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 PTCHD1Q96NR3 888 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 SPSB2Q99619 263 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 ARHGAP9Q9BRR9 750 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 CCDC167Q9P0B6 97 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 CES1P1Q9UKY3 287 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 MKL2Q9ULH7 1088 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 EXO1Q9UQ84 846 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 CAPN7Q9Y6W3 813 aa15.5■□□□□ 0.07
TSPAN4-208ENST00000409531 IDSB3KWA1 339 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 JRKO75564 520 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 ERAL1O75616 437 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 IGHEP01854 428 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 NTSP30990 170 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 S100A3P33764 101 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 FOLR3P41439 243 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 KIR3DL1P43629 444 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 HNRNPFP52597 415 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 EMP2P54851 167 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 KCNK10P57789 538 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 FOLH1Q04609 750 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 MAPRE2Q15555 327 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 PGS1Q32NB8 556 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 BORAQ6PGQ7 559 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 PRSS58Q8IYP2 241 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 MMP21Q8N119 569 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 TMEM52Q8NDY8 209 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 PLPP5Q8NEB5 264 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 VPS37AQ8NEZ2 397 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 OR7A2PQ8NGA2 310 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 OR8J2Q8NGG1 315 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 OR2Y1Q8NGV0 311 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 TSPEARQ8WU66 669 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 METTL21AQ8WXB1 218 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 EXOSC8Q96B26 276 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 COQ8BQ96D53 544 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 TEX37Q96LM6 180 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 PELOQ9BRX2 385 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 CRB3Q9BUF7 120 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 BHLHE41Q9C0J9 482 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 VN1R1Q9GZP7 353 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 MYLK2Q9H1R3 596 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 SOX17Q9H6I2 414 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 SLC35C2Q9NQQ7 365 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 C3orf18Q9UK00 162 aa15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 PTRH2Q9Y3E5 179 aaKnown RBP15.49■□□□□ 0.07
TSPAN4-208ENST00000409531 PDPK1O15530 556 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 FGF17O60258 216 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 LDB3O75112 727 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 CNOT3O75175 753 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 KLF7O75840 302 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 CSNK2A2P19784 350 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 IL12AP29459 219 aa15.48■□□□□ 0.07
TSPAN4-208ENST00000409531 MPIP34949 423 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms