RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 CCM2LQ9NUG4 571 aaPredicted RBP16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 ASB6Q9NWX5 421 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 KHDRBS3O75525 346 aaKnown RBP16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 CTHP32929 405 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 INHBCP55103 352 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 TPRG1LQ5T0D9 272 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 PLET1Q6UQ28 207 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 USP53Q70EK8 1073 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 UTS2BQ765I0 119 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 OR13J1Q8NGT2 312 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 OR6N1Q8NGY5 312 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 ASB11Q8WXH4 323 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 KAT2AQ92830 837 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 COQ7Q99807 217 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 G3V2L1 256 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 FARS2O95363 451 aaKnown RBP16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 CLCN2P51788 898 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 GID4Q8IVV7 300 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 PROKR2Q8NFJ6 384 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 ADAM29Q9UKF5 820 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 H0YJX3 145 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 GMFGO60234 142 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 HPRP00739 348 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 SH3BP2P78314 561 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 CDRT4Q8N9R6 151 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 OR5AR1Q8NGP9 310 aa16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 MTHFD2LQ9H903 347 aaPredicted RBP16.03■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF860A6NHJ4 632 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ARL6IP5O75915 188 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 CD36P16671 472 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ERVPABLB-1P60509 514 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 GRB7Q14451 532 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 NDUFA5Q16718 116 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF542PQ5EBM4 170 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF773Q6PK81 442 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF420Q8TAQ5 688 aaPredicted RBP16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 NAA11Q9BSU3 229 aaPredicted RBP16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 POLR2J2Q9GZM3 115 aaKnown RBP16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 SEC14L4Q9UDX3 406 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 A0A1W2PQ72 361 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 BRINP1O60477 761 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 WBP4O75554 376 aaKnown RBP16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 IFI30P13284 250 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF423Q2M1K9 1284 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZSWIM9Q86XI8 627 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 TOR1AIP2Q8NFQ8 470 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZFPM2Q8WW38 1151 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF696Q9H7X3 374 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 PPP4R1LQ9P1A2 415 aa16.02■□□□□ 0.16
PCDHA13-202ENST00000409494 TRAPPC6AO75865 159 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 DHFRP00374 187 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 HSD17B1P14061 328 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 BCAP31P51572 246 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 CASP6P55212 293 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 PPP1R8Q12972 351 aaKnown RBP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 ZNF829Q3KNS6 432 aaPredicted RBP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 PIGGQ5H8A4 983 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 DPY19L2P1Q6NXN4 242 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 UBALD2Q8IYN6 164 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 EDAQ92838 391 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 ACTRT3Q9BYD9 372 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 CTPS2Q9NRF8 586 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 CPNE7Q9UBL6 633 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 LOC100130705A0A1B0GUX0 176 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 A0A1W2PPW3 197 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 RAB36O95755 333 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 GGT5P36269 586 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 CSTF1Q05048 431 aaKnown RBP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 TUBA3CQ13748 450 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 PUM1Q14671 1186 aaKnown RBP eCLIP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 CARM1Q86X55 608 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 ZNF433Q8N7K0 673 aaPredicted RBP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 UXS1Q8NBZ7 420 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 TRIM43Q96BQ3 446 aaPredicted RBP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 TSSK6Q9BXA6 273 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 SDR39U1Q9NRG7 319 aaPredicted RBP16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 BAIAP2Q9UQB8 552 aa16.02■□□□□ 0.15
PCDHA13-202ENST00000409494 ANXA2P2A6NMY6 339 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 CLIC3O95833 236 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 ANXA2P07355 339 aaKnown RBP16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 RHCEP18577 417 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 MMP12P39900 470 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 PGGT1BP53609 377 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 RPS3AP61247 264 aaKnown RBP16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 SHQ1Q6PI26 577 aaKnown RBP16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 RASGEF1AQ8N9B8 481 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 PNLDC1Q8NA58 520 aaKnown RBP16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 MINDY2Q8NBR6 621 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 HSPBAP1Q96EW2 488 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 RNF121Q9H920 327 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 GRHPRQ9UBQ7 328 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 ZNF221Q9UK13 617 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 GLOD5A6NK44 160 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 STATHP02808 62 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 C1SP09871 688 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 RGRP47804 291 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 CTBSQ01459 385 aa16.01■□□□□ 0.15
PCDHA13-202ENST00000409494 CD47Q08722 323 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms