RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 SYT13Q7L8C5 426 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 VN1R4Q7Z5H5 301 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 SRFBP1Q8NEF9 429 aaKnown RBP3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 FAM46DQ8NEK8 389 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 ZCCHC10Q8TBK6 192 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 LZICQ8WZA0 190 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 TAMM41Q96BW9 452 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 KLHDC7BQ96G42 594 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 MSANTD3Q96H12 275 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 C7orf34Q96L11 122 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 TRAPPC9Q96Q05 1148 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 OR2A14Q96R47 310 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 GSDMCQ9BYG8 508 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 AMBRA1Q9C0C7 1298 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 PRO3102Q9H379 93 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 GLIPR2Q9H4G4 154 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 TMEM38AQ9H6F2 299 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 EPS8L2Q9H6S3 715 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 REEP1Q9H902 201 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 NEUROD4Q9HD90 331 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC2A4RGQ9NR83 387 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 FAM118AQ9NWS6 357 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 HRASLS2Q9NWW9 162 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 ACTR10Q9NZ32 417 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 C3orf18Q9UK00 162 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 PLXND1Q9Y4D7 1925 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 TESMINQ9Y4I5 508 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 ASB4Q9Y574 426 aa3.77□□□□□ -1.81
LRRTM4-201ENST00000409088 SNRNP200O75643 2136 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 LOC100130705A0A1B0GUX0 176 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 A0A1W2PPC4 97 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 A0A1W2PS29 197 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FAM170BA6NMN3 283 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 B4GAT1O43505 415 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 B4GALT2O60909 372 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CTSVO60911 334 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 GUCY1B2O75343 617 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 HPRP00739 348 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 C9P02748 559 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SEMG1P04279 462 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 BCHEP06276 602 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC35G6P0C7Q6 338 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ARAFP10398 606 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CYP4B1P13584 511 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ETS2P15036 469 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 UGT2B7P16662 529 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TYRP1P17643 537 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FPR1P21462 350 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 EEF1B2P24534 225 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IGFBP5P24593 272 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NTSP30990 170 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RRM2P31350 389 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DAPP51397 102 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CLCN2P51788 898 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RPS15AP62244 130 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SNRPNP63162 240 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 EEF1A2Q05639 463 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RGS1Q08116 209 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 BIRC2Q13490 618 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SIM2Q14190 667 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FZD2Q14332 565 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SMAD2Q15796 467 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 IFI44LQ53G44 452 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 RPS26P11Q5JNZ5 115 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SAXO2Q658L1 398 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 USP51Q70EK9 711 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 THAP5Q7Z6K1 395 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ASPGQ86U10 573 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 CYP4Z1Q86W10 505 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 C8orf59Q8N0T1 100 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ATG16L2Q8NAA4 619 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR52J3Q8NH60 311 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 GPBAR1Q8TDU6 330 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC37A2Q8TED4 501 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 XAGE5Q8WWM1 108 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TMIGD2Q96BF3 282 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 NEURL3Q96EH8 262 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OTUB1Q96FW1 271 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SLC6A18Q96N87 628 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 AMDHD1Q96NU7 426 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 MBOAT4Q96T53 435 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TSC22D3Q99576 134 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 YIPF4Q9BSR8 244 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SARGQ9BW04 601 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 FOXQ1Q9C009 403 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ADNPQ9H2P0 1102 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SIRT3Q9NTG7 399 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ZCCHC3Q9NUD5 404 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 EXD2Q9NVH0 621 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 THUMPD1Q9NXG2 353 aaKnown RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 USE1Q9NZ43 259 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TRPC4Q9UBN4 977 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 TMEFF2Q9UIK5 374 aaPredicted RBP3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 DMTF1Q9Y222 760 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 ANGPT4Q9Y264 503 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 PCDHGA2Q9Y5H1 932 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SCN3AQ9NY46 2000 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 A0A087WXM4 84 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 SMIM31A0A1B0GVY4 71 aa3.76□□□□□ -1.81
LRRTM4-201ENST00000409088 OR2A25A4D2G3 310 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms