RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PSKH2Q96QS6 385 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 TRAPPC13A5PLN9 417 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ANKRD28O15084 1053 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ADORA3P0DMS8 318 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 PYCR1P32322 319 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 JAG1P78504 1218 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 WDR53Q7Z5U6 358 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-202ENST00000409031 MTMR14Q8NCE2 650 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 OR5P2Q8WZ92 322 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 OSER1Q9NX31 292 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 SCML2Q9UQR0 700 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 MYO18AQ92614 2054 aaKnown RBP16.93■□□□□ 0.3
SMPD4-202ENST00000409031 SLC43A1O75387 559 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 BEST1O76090 585 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 SOX30O94993 753 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 PRAMEF14Q5SWL7 426 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 TMIGD1Q6UXZ0 262 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 SSX6Q7RTT6 188 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 OR9Q2Q8NGE9 314 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ADAD1Q96M93 576 aaKnown RBP16.93■□□□□ 0.3
SMPD4-202ENST00000409031 SLC2A11Q9BYW1 496 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 RGCCQ9H4X1 137 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 NMNAT1Q9HAN9 279 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-202ENST00000409031 KLHL9Q9P2J3 617 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 PSORS1C1Q9UIG5 152 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 PADI3Q9ULW8 664 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 TIAM2Q8IVF5 1701 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 KDELR3O43731 214 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MMP20O60882 483 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CLDN7O95471 211 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 PET100P0DJ07 73 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 FAM214AQ32MH5 1076 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 ADGRF1Q5T601 910 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 GTPBP8Q8N3Z3 284 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 SLC44A3Q8N4M1 653 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 RBM38Q9H0Z9 239 aaKnown RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 RNF39Q9H2S5 420 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 SLAMF8Q9P0V8 285 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 ATP6V1G2-DDX39BF2Z307 99 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MEN1O00255 615 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 POLR1CO15160 346 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 RPP14O95059 124 aaKnown RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 FOSL2P15408 326 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 PFKLP17858 780 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CCR8P51685 355 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 PRKXP51817 358 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MLLT10P55197 1068 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 VARS2Q5ST30 1063 aaKnown RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 KCTD9Q7L273 389 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CTU1Q7Z7A3 348 aaKnown RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 C3orf58Q8NDZ4 430 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 P2RY13Q9BPV8 354 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 DHRS9Q9BPW9 319 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 WDR83Q9BRX9 315 aaKnown RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 INPP5KQ9BT40 448 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 TMEM184CQ9NVA4 438 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 DNMT3AQ9Y6K1 912 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 HMX2A2RU54 273 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 RENP00797 406 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 GBAP04062 536 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CYP17A1P05093 508 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 ETFAP13804 333 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 FAM189A2Q15884 450 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MPP7Q5T2T1 576 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 GPR150Q8NGU9 434 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CD300LFQ8TDQ1 290 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MCHR1Q99705 422 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF416Q9BWM5 594 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MRTO4Q9UKD2 239 aaKnown RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 SARDHQ9UL12 918 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 C4AP0C0L4 1744 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 C4BP0C0L5 1744 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 PPP6CO00743 305 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 EDIL3O43854 480 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF821O75541 412 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 MLLT1Q03111 559 aaPredicted RBP16.92■□□□□ 0.3
SMPD4-202ENST00000409031 GPR142Q7Z601 462 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 HOXD1Q9GZZ0 328 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 SUV39H2Q9H5I1 410 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 CACNG4Q9UBN1 327 aa16.92■□□□□ 0.3
SMPD4-202ENST00000409031 SLC22A31A6NKX4 558 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CDC40O60508 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMPD4-202ENST00000409031 HTR1AP08908 422 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 GIMD1P0DJR0 217 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 M6PRP20645 277 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 PDHA2P29803 388 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 SLC6A6P31641 620 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TCEAL5Q5H9L2 206 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 FRMPD2BQ6IN97 320 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CLECL1Q8IZS7 167 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 TRMT10AQ8TBZ6 339 aaKnown RBP16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CASTOR1Q8WTX7 329 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 SLC39A13Q96H72 371 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF583Q96ND8 569 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 GPSM3Q9Y4H4 160 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 BTN3A2P78410 334 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 PLEKHS1Q5SXH7 462 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 FAM69AQ5T7M9 428 aa16.91■□□□□ 0.3
SMPD4-202ENST00000409031 CBLL1Q75N03 491 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms