RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 EXOSC8Q96B26 276 aaKnown RBP27.46■■□□□ 1.99
USP42-202ENST00000404008 ZNF764Q96H86 408 aaPredicted RBP27.46■■□□□ 1.99
USP42-202ENST00000404008 CRELD1Q96HD1 420 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 ADAP2Q9NPF8 381 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 PNO1Q9NRX1 252 aaKnown RBP27.46■■□□□ 1.99
USP42-202ENST00000404008 AIG1Q9NVV5 245 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 TAS2R7Q9NYW3 318 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 NSG1A0A0A6YYJ2 146 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 ERAL1O75616 437 aaKnown RBP27.45■■□□□ 1.98
USP42-202ENST00000404008 HPP00738 406 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 HPCAL1P37235 193 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 PDE7AQ13946 482 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 ELAVL1Q15717 326 aaKnown RBP27.45■■□□□ 1.98
USP42-202ENST00000404008 PRSS53Q2L4Q9 553 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 DCAF10Q5QP82 559 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 TMEM198Q66K66 360 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 PAPD4Q6PIY7 484 aaKnown RBP27.45■■□□□ 1.98
USP42-202ENST00000404008 ST13P4Q8IZP2 240 aaPredicted RBP27.45■■□□□ 1.98
USP42-202ENST00000404008 MTERF3Q96E29 417 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 CNRIP1Q96F85 164 aaPredicted RBP27.45■■□□□ 1.98
USP42-202ENST00000404008 FER1L6-AS2Q96M78 137 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 DGAT2Q96PD7 388 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 TUBB6Q9BUF5 446 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 ZNF160Q9HCG1 818 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 SLC35C2Q9NQQ7 365 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 ZNF780BQ9Y6R6 833 aa27.45■■□□□ 1.98
USP42-202ENST00000404008 A0A0G2JND7 137 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 TBX19O60806 448 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 IFNA16P05015 189 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 SLC35E2P0CK97 266 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 CPMP14384 443 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 CLDN8P56748 225 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 C21orf58P58505 322 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 GNGT1P63211 74 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 PLIN5Q00G26 463 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 TERF2Q15554 542 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 ZNF750Q32MQ0 723 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 CPZQ66K79 652 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 FAM180BQ6P0A1 224 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 RIMKLAQ8IXN7 391 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 FAM9CQ8IZT9 166 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 TMEM102Q8N9M5 508 aaPredicted RBP27.44■■□□□ 1.98
USP42-202ENST00000404008 IMMP1LQ96LU5 166 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 ZNF681Q96N22 645 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 LPAR4Q99677 370 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 PRORYQ9H606 182 aa27.44■■□□□ 1.98
USP42-202ENST00000404008 SAGE2PA6NJ88 616 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 ARGFXA6NJG6 315 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 A8MUA0 341 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 ANKRD28O15084 1053 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 SCAMP2O15127 329 aaKnown RBP27.43■■□□□ 1.98
USP42-202ENST00000404008 PORP16435 677 aaPredicted RBP27.43■■□□□ 1.98
USP42-202ENST00000404008 PRPS1L1P21108 318 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 ANKRD26P1Q6NSI1 321 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 KRTCAP2Q8N6L1 136 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 PPWD1Q96BP3 646 aaKnown RBP27.43■■□□□ 1.98
USP42-202ENST00000404008 RBM18Q96H35 190 aaKnown RBP27.43■■□□□ 1.98
USP42-202ENST00000404008 MARK4Q96L34 752 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 PELOQ9BRX2 385 aaKnown RBP27.43■■□□□ 1.98
USP42-202ENST00000404008 BRINP2Q9C0B6 783 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 ATP6V1HQ9UI12 483 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 GPR45Q9Y5Y3 372 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 KCNMB2Q9Y691 235 aa27.43■■□□□ 1.98
USP42-202ENST00000404008 NBEAQ8NFP9 2946 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 GABRR3A8MPY1 467 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 E9PBE3 544 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 MASP2O00187 686 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 UBDO15205 165 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 OR10H2O60403 315 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 KLHL41O60662 606 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 IDO1P14902 403 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 PCSK2P16519 638 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 CSNK2A2P19784 350 aaPredicted RBP27.42■■□□□ 1.98
USP42-202ENST00000404008 RPL3P39023 403 aaKnown RBP27.42■■□□□ 1.98
USP42-202ENST00000404008 FEN1P39748 380 aaKnown RBP27.42■■□□□ 1.98
USP42-202ENST00000404008 SEC24CP53992 1094 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 RRADP55042 308 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 CEBPEQ15744 281 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 R3HCC1LQ7Z5L2 792 aaKnown RBP27.42■■□□□ 1.98
USP42-202ENST00000404008 SAMD14Q8IZD0 417 aaPredicted RBP27.42■■□□□ 1.98
USP42-202ENST00000404008 PTPMT1Q8WUK0 201 aaPredicted RBP27.42■■□□□ 1.98
USP42-202ENST00000404008 PPCDCQ96CD2 204 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 ENTPD4Q9Y227 616 aa27.42■■□□□ 1.98
USP42-202ENST00000404008 GALNSP34059 522 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 DUSP2Q05923 314 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 GSTA3Q16772 222 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 ZNF385BQ569K4 471 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 C19orf48Q6RUI8 117 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 DGAT2L6Q6ZPD8 337 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 NFAM1Q8NET5 270 aaPredicted RBP27.41■■□□□ 1.98
USP42-202ENST00000404008 TMEM120AQ9BXJ8 343 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 ING2Q9H160 280 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 GIMAP4Q9NUV9 329 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 MAPRE3Q9UPY8 281 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 CLCA3PQ9Y6N3 262 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 ATMQ13315 3056 aa27.41■■□□□ 1.98
USP42-202ENST00000404008 C17orf105B2RV13 164 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 ATP1B1P05026 303 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 COX7A2P14406 83 aa27.4■■□□□ 1.98
USP42-202ENST00000404008 TNNI3P19429 210 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms