RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 AFF3P51826 1226 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 MVDP53602 400 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PAGE2BQ5JRK9 111 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CCDC80Q76M96 950 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TMPRSS11BQ86T26 416 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 OXR1Q8N573 874 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 LILRA3Q8N6C8 439 aaPredicted RBP15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 OR10G2Q8NGC3 310 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 OR4C15Q8NGM1 316 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ZHX1-C8orf76Q96EF9 292 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 WDR92Q96MX6 357 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 KCNC2Q96PR1 638 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FEVQ99581 238 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 BTBD2Q9BX70 525 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SLIRPQ9GZT3 109 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TMEM38AQ9H6F2 299 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 THSD1Q9NS62 852 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FKBP14Q9NWM8 211 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TRNAU1APQ9NX07 287 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 DYRK1BQ9Y463 629 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TESMINQ9Y4I5 508 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TNRC6BQ9UPQ9 1833 aaKnown RBP15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CUL9Q8IWT3 2517 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TLR4O00206 839 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SH3BGRLO75368 114 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SERPINB7O75635 380 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 C1orf105O95561 183 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CBX3Q13185 183 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PDE7AQ13946 482 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 BCL7AQ4VC05 210 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ZNF385BQ569K4 471 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PEAR1Q5VY43 1037 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TMEM236Q5W0B7 351 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ZC3H14Q6PJT7 736 aaKnown RBP15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TMEM220Q6QAJ8 160 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ZNF547Q8IVP9 402 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 LAS2Q8IYD9 372 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 DEPDC4Q8N2C3 294 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 DNAJC22Q8N4W6 341 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SLC5A8Q8N695 610 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 RHOXF1Q8NHV9 184 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SLC35A5Q9BS91 424 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TMEM74BQ9NUR3 256 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 RAPGEFL1Q9UHV5 662 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FANCMQ8IYD8 2048 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 GON4LQ3T8J9 2241 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SPAG17Q6Q759 2223 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 H3BM21 787 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 IFNA14P01570 189 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ETFAP13804 333 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 GNSP15586 552 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 HOXD12P35452 270 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TBPL1P62380 186 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 HBA1P69905 142 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SCARB2Q14108 478 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ZNF658BQ4V348 819 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 COX20Q5RI15 118 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 HIST2H2AA3Q6FI13 130 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TRIM40Q6P9F5 258 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ENPP7Q6UWV6 458 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ANGPTL8Q6UXH0 198 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 COMMD6Q7Z4G1 85 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ZNF480Q8WV37 535 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PPCDCQ96CD2 204 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 LINC00615Q96LM1 132 aaPredicted RBP15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ALOXE3Q9BYJ1 711 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 EHD1Q9H4M9 534 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FGF22Q9HCT0 170 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 MYNNQ9NPC7 610 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 DMRT3Q9NQL9 472 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SUSD2Q9UGT4 822 aa15.13■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CLCA1A8K7I4 914 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 C6orf47O95873 294 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 VIPP01282 170 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CDK1P06493 297 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FURINP09958 794 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 C1GALT1C1LP0DN25 315 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PBLDP30039 288 aaPredicted RBP15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CSNK1EP49674 416 aaKnown RBP15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CLK1P49759 484 aaKnown RBP15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SPIBQ01892 262 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FZD2Q14332 565 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SLBPQ14493 270 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 MICAQ29983 383 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PERM1Q5SV97 790 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SYTL1Q8IYJ3 562 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 OR4K1Q8NGD4 311 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 MTERF3Q96E29 417 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SGPP1Q9BX95 441 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ARMC7Q9H6L4 198 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 GPATCH2Q9NW75 528 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SPASTQ9UBP0 616 aa15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PCYT1BQ9Y5K3 369 aaPredicted RBP15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 DNMT3AQ9Y6K1 912 aaPredicted RBP15.12■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PRSS38A1L453 326 aa15.11■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TMEM247A6NEH6 219 aa15.11■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PDHA2P29803 388 aa15.11■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PRIM2P49643 509 aa15.11■□□□□ 0.01
CHRFAM7A-203ENST00000401522 RPS3AP61247 264 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms