RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ASB15Q8WXK1 588 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 KCTD13Q8WZ19 329 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 WDR92Q96MX6 357 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 RMI1Q9H9A7 625 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 VDAC3Q9Y277 283 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
VAPA-202ENST00000400000 ZNF765Q7L2R6 523 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 TMPRSS12Q86WS5 348 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 CIDECQ96AQ7 238 aaPredicted RBP13.18□□□□□ -0.3
VAPA-202ENST00000400000 HAO2Q9NYQ3 351 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 MYH10P35580 1976 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 CDKN2DP55273 166 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 PCLAFQ15004 111 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 ABRAXAS2Q15018 415 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 LTC4SQ16873 150 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 OSTF1Q92882 214 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 TMCO6Q96DC7 493 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 MGAT4BQ9UQ53 548 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 SH3PXD2BA1X283 911 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 RAD51DO75771 328 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 P04436 131 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 AMY2BP19961 511 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 SHMT2P34897 504 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 PTGS2P35354 604 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 STC1P52823 247 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 UBE2NP61088 152 aaKnown RBP13.18□□□□□ -0.3
VAPA-202ENST00000400000 ERV3-1Q14264 604 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 C3orf38Q5JPI3 329 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 GPR157Q5UAW9 335 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 GPR137CQ8N3F9 429 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 OR10T2Q8NGX3 314 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 DERL2Q9GZP9 239 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 CUEDC1Q9NWM3 386 aaPredicted RBP13.18□□□□□ -0.3
VAPA-202ENST00000400000 GMEB1Q9Y692 573 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 S1PR1P21453 382 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 GPR17Q13304 367 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 ZNF517Q6ZMY9 492 aaPredicted RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 TMEM110Q86TL2 294 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 OR4D6Q8NGJ1 314 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 FCAMRQ8WWV6 532 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 ABCG2Q9UNQ0 655 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 MEIS3P1A6NDR6 274 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 SHOXO15266 292 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 THEGLP0DJG4 465 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 C6P13671 934 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 FAM189BP81408 668 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 PSAPL1Q6NUJ1 521 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 CEACAM19Q7Z692 300 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 PHC2Q8IXK0 858 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 SLC44A3Q8N4M1 653 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 SYT14Q8NB59 555 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 PEX13Q92968 403 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 GLYATL1Q969I3 302 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 TREX2Q9BQ50 279 aaPredicted RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 DFNA5O60443 496 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 SOX9P48436 509 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 DHCR24Q15392 516 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 KLBQ86Z14 1044 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 TP53INP2Q8IXH6 220 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 ZNF775Q96BV0 537 aaPredicted RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 LRRC46Q96FV0 321 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 METTL2AQ96IZ6 378 aaKnown RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 KLHL15Q96M94 604 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 EIF5A2Q9GZV4 153 aaKnown RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 CD70P32970 193 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 BTBD16Q32M84 506 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 C22orf42Q6IC83 251 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 BBS10Q8TAM1 723 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 HDAC2Q92769 488 aaKnown RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 CPNE2Q96FN4 548 aaPredicted RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 BOCQ9BWV1 1114 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 DMAC2Q9NW81 257 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 ATRNO75882 1429 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 FAM159BA6NKW6 160 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 MEIS3P2A8K0S8 358 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 FAM155AB1AL88 458 aaPredicted RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 MT-ND5P03915 603 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 GSTM3P21266 225 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 STOMP27105 288 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 LEG1Q6P5S2 330 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 LIPIQ6XZB0 460 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 IQCF1Q8N6M8 205 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 TSGA13Q96PP4 275 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 RBM24Q9BX46 236 aaKnown RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 RPF2Q9H7B2 306 aaKnown RBP13.17□□□□□ -0.3
VAPA-202ENST00000400000 ACAD8Q9UKU7 415 aa13.17□□□□□ -0.3
VAPA-202ENST00000400000 I3L521 148 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms