RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PRR23AA6NEV1 266 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LRRC72A6NJI9 287 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OR52A4PA6NMU1 304 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ASNA1O43681 348 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FHP07954 510 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CHRM5P08912 532 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GLULP15104 373 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CSNK2A2P19784 350 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HNRNPA2B1P22626 353 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CASP9P55211 416 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRR5P85299 388 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RGS1Q08116 209 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TNFAIP8L2Q6P589 184 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CCDC71Q8IV32 467 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NT5CQ8TCD5 201 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NAA50Q9GZZ1 169 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACOT13Q9NPJ3 140 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FKBP14Q9NWM8 211 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TRNAU1APQ9NX07 287 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CALML5Q9NZT1 146 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PSORS1C1Q9UIG5 152 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ENTPD4Q9Y227 616 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RNF6Q9Y252 685 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HS3ST3A1Q9Y663 406 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HEATR5BQ9P2D3 2071 aa16.77■□□□□ 0.27
HLA-DQB1-204ENST00000399084 A0A0G2JPF8 293 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 URADA6NGE7 173 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CLCA1A8K7I4 914 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 HNRNPCL2B2RXH8 293 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 HNRNPCL3B7ZW38 293 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FAAHO00519 579 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CASC3O15234 703 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CLPXO76031 633 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 INMTO95050 263 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 HNRNPCL4P0DMR1 293 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 EPHA2P29317 976 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CD6P30203 668 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 KRT20P35900 424 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PUM1Q14671 1186 aaKnown RBP eCLIP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 GPR153Q6NV75 609 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SLC48A1Q6P1K1 146 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZNF793Q6ZN11 406 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SMYD1Q8NB12 490 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TMEM145Q8NBT3 493 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TBC1D15Q8TC07 691 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SGCDQ92629 289 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 GAL3ST3Q96A11 431 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 YIPF6Q96EC8 236 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DGCR6LQ9BY27 220 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ABCG4Q9H172 646 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 C3orf14Q9HBI5 128 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZCCHC3Q9NUD5 404 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SEC14L3Q9UDX4 400 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 LIPT1Q9Y234 373 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SLC9A8Q9Y2E8 581 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DGKBQ9Y6T7 804 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CHD9Q3L8U1 2897 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CLDN24A6NM45 220 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ISM1B1AKI9 464 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 HAT1O14929 419 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TNFSF14O43557 240 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SLC28A2O43868 658 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 BCAS1O75363 584 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 EGFP01133 1207 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 NCBP2P52298 156 aaKnown RBP eCLIP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 EMP3P54852 163 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 COX10Q12887 443 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TP53BP2Q13625 1128 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TBCEQ15813 527 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 NDUFA9Q16795 377 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TOR1AIP1Q5JTV8 583 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ZNF770Q6IQ21 691 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SLC16A12Q6ZSM3 486 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ARHGAP22Q7Z5H3 698 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PAQR7Q86WK9 346 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 GJD3Q8N144 294 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DNAJC22Q8N4W6 341 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 C9orf43Q8TAL5 461 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FAM81AQ8TBF8 368 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TRUB1Q8WWH5 349 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DNASE1L2Q92874 299 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 MSANTD3Q96H12 275 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CRELD1Q96HD1 420 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TREX2Q9BQ50 279 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 IMPAD1Q9NX62 359 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PLEKHM1Q9Y4G2 1056 aa16.76■□□□□ 0.27
HLA-DQB1-204ENST00000399084 A0A1W2PR48 441 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 EMC8O43402 210 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 PROM1O43490 865 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 SLITRK5O94991 958 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 AGR2O95994 175 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 H1F0P07305 194 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 NR2F1P10589 423 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 TNFRSF1BP20333 461 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 MAT2AP31153 395 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ILKQ13418 452 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 CTF1Q16619 201 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 DCST1Q5T197 706 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 FRMPD2BQ6IN97 320 aa16.75■□□□□ 0.27
HLA-DQB1-204ENST00000399084 ENPP7Q6UWV6 458 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms