RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MORN4Q8NDC4 146 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF721Q8TF20 911 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TM4SF18Q96CE8 201 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TAAR6Q96RI8 345 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 BARD1Q99728 777 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 KLHL1Q9NR64 748 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FIS1Q9Y3D6 152 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CCDC151A5D8V7 595 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR10H2O60403 315 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PRAMEF2O60811 474 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CRCPO75575 148 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ITGA10O75578 1167 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 NEURL1O76050 574 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CHRNGP07510 517 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 COX7A2P14406 83 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MRPL49Q13405 166 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 NR6A1Q15406 480 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF766Q5HY98 468 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SPDYAQ5MJ70 313 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR52E8Q6IFG1 317 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RPUSD3Q6P087 351 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FAM180BQ6P0A1 224 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HSDL2Q6YN16 418 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF227Q86WZ6 799 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ARMC10Q8N2F6 343 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GALNT11Q8NCW6 608 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MDS2Q8NDY4 140 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SUN3Q8TAQ9 357 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SENP5Q96HI0 755 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 LRFN1Q9P244 771 aa13.1□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GNG14A0A1W2PPG7 69 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 WWP2O00308 870 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR2J2O76002 312 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZFAND5O76080 213 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 UROSP10746 265 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PIK3R1P27986 724 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ARRB2P32121 409 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ETV4P43268 484 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CYB561P49447 251 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RNF4P78317 190 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PMP22Q01453 160 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ACSM2AQ08AH3 577 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ACSM2BQ68CK6 577 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR4K14Q8NGD5 310 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FAR1Q8WVX9 515 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RIT1Q92963 219 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 C11orf24Q96F05 449 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CNPPD1Q9BV87 410 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 EBPLQ9BY08 206 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SENP1Q9P0U3 644 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MYOTQ9UBF9 498 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HEY2Q9UBP5 337 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CES1P1Q9UKY3 287 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PCDHA9Q9Y5H5 950 aa13.09□□□□□ -0.31
HLA-DQB1-202ENST00000399079 C1orf226A1L170 272 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SERTM1A2A2V5 107 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TMEM233B4DJY2 109 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 H3BQF6 201 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FCHO1O14526 889 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PCDH7O60245 1069 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GUCY1B2O75343 617 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CBX6O95503 412 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SLC35E2P0CK97 266 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PTGER1P34995 402 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ALDH9A1P49189 494 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HLCSP50747 726 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 XKP51811 444 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HK2P52789 917 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ERVK-8P63133 956 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 BIKQ13323 160 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF267Q14586 743 aaPredicted RBP13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 IMPG1Q17R60 797 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SPIN4Q56A73 249 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TNFAIP8L3Q5GJ75 292 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SLC48A1Q6P1K1 146 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FAM180AQ6UWF9 173 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TRIM46Q7Z4K8 759 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 C9orf40Q8IXQ3 194 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FBXL20Q96IG2 436 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 AGPAT4Q9NRZ5 378 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 COPS7AQ9UBW8 275 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ERVK-19Q9WJR5 959 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DLGAP4Q9Y2H0 992 aa13.08□□□□□ -0.31
HLA-DQB1-202ENST00000399079 AZIN1O14977 448 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CTIFO43310 598 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DYRK3O43781 588 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ERLIN1O75477 346 aa13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ERAL1O75616 437 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLC25A12O75746 678 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms