RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 IGHG1P01857 330 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 FCER2P06734 321 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 HIST1H2AGP0C0S8 130 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 TPBGLP0DKB5 382 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 ETS1P14921 441 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 UGT1A4P22310 534 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 DNAJB1P25685 340 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 MAT2AP31153 395 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 RPL9P32969 192 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 ASMTP46597 345 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 RABIFP47224 123 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 NUMBP49757 651 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 NDST1P52848 882 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 LIMK2P53671 638 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 GEMP55040 296 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 CDKL1Q00532 357 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 GALK2Q01415 458 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 KIAA0141Q14154 515 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 GCKRQ14397 625 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SMC1AQ14683 1233 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 FASTKD3Q14CZ7 662 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 KRT31Q15323 416 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 WSCD2Q2TBF2 565 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 ZNF528Q3MIS6 628 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 TTC31Q49AM3 519 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 NEPROQ6NW34 567 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 GDPGP1Q6ZNW5 385 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 RBM43Q6ZSC3 357 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 GPR142Q7Z601 462 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 PARP8Q8N3A8 854 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 RNF148Q8N7C7 305 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 MINDY2Q8NBR6 621 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 CCDC197Q8NCU1 140 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 CCNYQ8ND76 341 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 OR2T6Q8NHC8 308 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 TCP11Q8WWU5 503 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 HIST1H2ACQ93077 130 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 ZNF274Q96GC6 653 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 PCED1BQ96HM7 432 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 RPGRIP1Q96KN7 1286 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SAMD8Q96LT4 415 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 NSMCE2Q96MF7 247 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 PRICKLE1Q96MT3 831 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 RUNDC3BQ96NL0 473 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 AGAP4Q96P64 663 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 LGMNQ99538 433 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 COQ7Q99807 217 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SIRPDQ9H106 197 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 CXXC4Q9H2H0 198 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 C3orf14Q9HBI5 128 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 B3GAT2Q9NPZ5 323 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SPHK2Q9NRA0 654 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 STARD5Q9NSY2 213 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.27□□□□□ -2.05
CD47-203ENST00000398258 CNOT2Q9NZN8 540 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 THAP10Q9P2Z0 257 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 EPS15L1Q9UBC2 864 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SPASTQ9UBP0 616 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 MRTO4Q9UKD2 239 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 SMAD5-AS1Q9Y6J3 95 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 A0A0U1RQG5 324 aaPredicted RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 TMEM89A2RUT3 159 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ARHGEF33A8MVX0 844 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 K7EQG2 157 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 EEF2KO00418 725 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 RASGRF2O14827 1237 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 DCXO43602 365 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 SSX5O60225 188 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ATP6V1G1O75348 118 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 OR6B1O95007 311 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 SYNGR4O95473 234 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 MT-ATP6P00846 226 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 CCDC192P0DO97 292 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 KRT5P13647 590 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 MARCKSP29966 332 aaPredicted RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 CCND2P30279 289 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 GPC3P51654 580 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 RPL27P61353 136 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 IRX1P78414 480 aaPredicted RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 HTD2P86397 168 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 FUT7Q11130 342 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 PDIA5Q14554 519 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 SLC17A1Q14916 467 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 FAM189A2Q15884 450 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 HAGHQ16775 308 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 KNOP1Q1ED39 458 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 CCDC40Q4G0X9 1142 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 GPAT3Q53EU6 434 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 FASTKD1Q53R41 847 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 C12orf60Q5U649 245 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 CDC42EP5Q6NZY7 148 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ADGRD2Q7Z7M1 963 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 SYVN1Q86TM6 617 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 YRDCQ86U90 279 aaKnown RBP2.26□□□□□ -2.05
CD47-203ENST00000398258 TBC1D10CQ8IV04 446 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 LMNTD2Q8IXW0 634 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 FAM71CQ8NEG0 241 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 NEK11Q8NG66 645 aa2.26□□□□□ -2.05
CD47-203ENST00000398258 ATP8B4Q8TF62 1192 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms