RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 COL28A1Q2UY09 1125 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 PRSS36Q5K4E3 855 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FRG2Q64ET8 278 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 KLHL17Q6TDP4 642 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ZNF852Q6ZMS4 543 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ZNF704Q6ZNC4 412 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 USP45Q70EL2 814 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 OTOP2Q7RTS6 562 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TRIM46Q7Z4K8 759 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TMPRSS11BQ86T26 416 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 C1orf52Q8N6N3 182 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 TTC29Q8NA56 475 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 GPR151Q8TDV0 419 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 UTP15Q8TED0 518 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 ZNF431Q8TF32 576 aaPredicted RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 TCEAL4Q96EI5 215 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RNF31Q96EP0 1072 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SCRN2Q96FV2 425 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TRMT61AQ96FX7 289 aaKnown RBP4.8□□□□□ -1.64
SSR1-202ENST00000397511 PDXPQ96GD0 296 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FRG2BQ96QU4 278 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 C12orf57Q99622 126 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 NTMT1Q9BV86 223 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SRRQ9GZT4 340 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 KRT84Q9NSB2 600 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 TMEM184CQ9NVA4 438 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RDH8Q9NYR8 311 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 UBQLN2Q9UHD9 624 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 RAB23Q9ULC3 237 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FZD4Q9ULV1 537 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 SCML1Q9UN30 329 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 COPS3Q9UNS2 423 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 MAPRE3Q9UPY8 281 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 FKBP7Q9Y680 259 aa4.8□□□□□ -1.64
SSR1-202ENST00000397511 ANAPC1Q9H1A4 1944 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 A0A0B4J203 849 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 WASHC1A8K0Z3 465 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 PRRT4C9JH25 899 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 RFXAPO00287 272 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 PROM1O43490 865 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 TGM5O43548 720 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 TSPAN6O43657 245 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 GREM1O60565 184 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 STATHP02808 62 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 RAF1P04049 648 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 FABP3P05413 133 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 C1SP09871 688 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ATP1B2P14415 290 aaPredicted RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 CHMP24386 653 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 POU1F1P28069 291 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 CCR2P41597 374 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 CENPAP49450 140 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 HOXA1P49639 335 aaPredicted RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 AKR1D1P51857 326 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 MAP2K6P52564 334 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 CLDN8P56748 225 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 RRAS2P62070 204 aaPredicted RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 SNRPD1P62314 119 aaKnown RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 CREMQ03060 361 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 RUNX1T1Q06455 604 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ACSM2AQ08AH3 577 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 GRIN2CQ14957 1233 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 PROX2Q3B8N5 592 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 SYTL3Q4VX76 610 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ARSIQ5FYB1 569 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ZMAT1Q5H9K5 638 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 FAM209BQ5JX69 171 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ACSM2BQ68CK6 577 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 OR2T5Q6IEZ7 315 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ANKRD54Q6NXT1 300 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 MZT2BQ6NZ67 158 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 PLBD1Q6P4A8 553 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 FAM131AQ6UXB0 335 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 TPRG1Q6ZUI0 275 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 SZRD1Q7Z422 152 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 HSD11B1LQ7Z5J1 315 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 GPR149Q86SP6 731 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 TSPYL5Q86VY4 417 aaPredicted RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 NLRP8Q86W28 1048 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 RNF130Q86XS8 419 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 TMEM151BQ8IW70 566 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 MMP21Q8N119 569 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 NAGSQ8N159 534 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 CYP4Z2PQ8N1L4 340 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 STX19Q8N4C7 294 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 CAMKK1Q8N5S9 505 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 OR2T29Q8NH02 315 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 ZNF675Q8TD23 568 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 MRPS31Q92665 395 aaKnown RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 USP7Q93009 1102 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 PAWRQ96IZ0 340 aaKnown RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 FOPNLQ96NB1 174 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 MCCC1Q96RQ3 725 aaPredicted RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 CPPED1Q9BRF8 314 aaPredicted RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 RIOK2Q9BVS4 552 aaKnown RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
SSR1-202ENST00000397511 SLC46A2Q9BY10 475 aa4.79□□□□□ -1.64
SSR1-202ENST00000397511 KCNH6Q9H252 994 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms