RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SEMA3GQ9NS98 782 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 MRGBPQ9NV56 204 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 ATAD3AQ9NVI7 634 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 TAS2R7Q9NYW3 318 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 ENTPD4Q9Y227 616 aa22.14■■□□□ 1.14
TSPAN4-203ENST00000397397 IGKV3D-11A0A0A0MRZ8 115 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 TMEM8BA6NDV4 472 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 TAF4O00268 1085 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 CYC1P08574 325 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 LAMP1P11279 417 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 FEN1P39748 380 aaKnown RBP22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 XKP51811 444 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 SERTAD2Q14140 314 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 ZNF750Q32MQ0 723 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 COQ8BQ96D53 544 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 BBS4Q96RK4 519 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 CCDC167Q9P0B6 97 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 CLDN16Q9Y5I7 305 aa22.14■■□□□ 1.13
TSPAN4-203ENST00000397397 A0A1W2PS29 197 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 PDPK1O15530 556 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 IGHEP01854 428 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 POLR2JP52435 117 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 IGLV3-21P80748 117 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 SRSF11Q05519 484 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 DPY19L1Q2PZI1 675 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 FAM174BQ3ZCQ3 159 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 SPANXN4Q5MJ08 99 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 SAMD14Q8IZD0 417 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 ANKS4BQ8N8V4 417 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 CIDECQ96AQ7 238 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 CNRIP1Q96F85 164 aaPredicted RBP22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 DUSP26Q9BV47 211 aa22.13■■□□□ 1.13
TSPAN4-203ENST00000397397 TCRBV16S1A1N1A0A5B0 115 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 FAM234BA2RU67 622 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 CPMP14384 443 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 PORP16435 677 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 CSNK2A2P19784 350 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 NTSP30990 170 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 S100A3P33764 101 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 KLF10Q13118 480 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 SRSF6Q13247 344 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 BIKQ13323 160 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 SSPNQ14714 243 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 LANCL3Q6ZV70 420 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 CAMKMTQ7Z624 323 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 ANKRD37Q7Z713 158 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 FUNDC1Q8IVP5 155 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 C7orf57Q8NEG2 295 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 ZNF681Q96N22 645 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 BHLHE41Q9C0J9 482 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 TMEM45AQ9NWC5 275 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 ARMCX1Q9P291 453 aa22.12■■□□□ 1.13
TSPAN4-203ENST00000397397 KLK10O43240 276 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 CREG1O75629 220 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 DCTN3O75935 186 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 IFNA16P05015 189 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 OTX2P32243 289 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 KIR3DL1P43629 444 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 ZFP36L2P47974 494 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 DGKQP52824 942 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 MPEG1Q2M385 716 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 OR4F3Q6IEY1 312 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 TMEM205Q6UW68 189 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 LRRC25Q8N386 305 aaPredicted RBP22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 DGAT2Q96PD7 388 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 DPH1Q9BZG8 443 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 MYLK2Q9H1R3 596 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 PNO1Q9NRX1 252 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 C19orf25Q9UFG5 118 aaPredicted RBP22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 CAPN7Q9Y6W3 813 aa22.11■■□□□ 1.13
TSPAN4-203ENST00000397397 SYNDIG1LA6NDD5 238 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 A8MUA0 341 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 MYO1GB0I1T2 1018 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 NR5A2O00482 541 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 OR10H2O60403 315 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 IL6P05231 212 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 SLC35E2P0CK97 266 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 MMP11P24347 488 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 STT3AP46977 705 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 KCNK10P57789 538 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 OR4D2P58180 307 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 PLIN5Q00G26 463 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 DUSP2Q05923 314 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 GK5Q6ZS86 529 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 CCDC116Q8IYX3 515 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 NATD1Q8N6N6 113 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 OR8J2Q8NGG1 315 aa22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 PPWD1Q96BP3 646 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-203ENST00000397397 PGRP06401 933 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 CD1EP15812 388 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 EFNA1P20827 205 aaPredicted RBP22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 ADSLP30566 484 aaPredicted RBP22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 NCBP2P52298 156 aaKnown RBP eCLIP22.09■■□□□ 1.138e-7■■■□□ 17.1
TSPAN4-203ENST00000397397 IL10RAQ13651 578 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 CEBPEQ15744 281 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 SFT2D3Q587I9 215 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 BLOC1S3Q6QNY0 202 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 RAB43Q86YS6 212 aa22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 ST13P4Q8IZP2 240 aaPredicted RBP22.09■■□□□ 1.13
TSPAN4-203ENST00000397397 C8orf44Q96CB5 159 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms