RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SLC13A3Q8WWT9 602 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 TUBGCP3Q96CW5 907 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 MAGED4Q96JG8 741 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 CCT8L2Q96SF2 557 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 CCT7Q99832 543 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 SIKE1Q9BRV8 207 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 CENPKQ9BS16 269 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 TUBB6Q9BUF5 446 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 ZNF700Q9H0M5 742 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 KLHL14Q9P2G3 628 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 ZFP69BQ9UJL9 534 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 PTGDR2Q9Y5Y4 395 aa12.81□□□□□ -0.36
SEC13-205ENST00000397101 CACNA1CQ13936 2221 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 ATP6AP2A0A1C7CYW4 349 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 MAGEB17A8MXT2 336 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 CDK2AP1O14519 115 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 NDUFAB1O14561 156 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 NDUFS4O43181 175 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 ATP6AP2O75787 350 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 CYC1P08574 325 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 SLC35G6P0C7Q6 338 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 ITGAMP11215 1152 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 FBLP22087 321 aaKnown RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 GSTM2P28161 218 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 AHRP35869 848 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 PIK3CBP42338 1070 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 VSX2P58304 361 aaPredicted RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 HMGCS1Q01581 520 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 ZNF33BQ06732 778 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 E2F2Q14209 437 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 PCOLCEQ15113 449 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 PRTGQ2VWP7 1150 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 GALNTL6Q49A17 601 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 SLC9B1Q4ZJI4 515 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 ZNF766Q5HY98 468 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 TOR1AIP1Q5JTV8 583 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 C10orf62Q5T681 223 aaPredicted RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 CHSY3Q70JA7 882 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 EID3Q8N140 333 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 DTWD1Q8N5C7 304 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 GBP7Q8N8V2 638 aaPredicted RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 ANKRD53Q8N9V6 530 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 CAMKVQ8NCB2 501 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 BCAS4Q8TDM0 211 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 IMMP1LQ96LU5 166 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 C10orf90Q96M02 699 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 SERPINI1Q99574 410 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 TMEM120AQ9BXJ8 343 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
SEC13-205ENST00000397101 DMRT3Q9NQL9 472 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 STMN3Q9NZ72 180 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 MKL2Q9ULH7 1088 aa12.8□□□□□ -0.36
SEC13-205ENST00000397101 NAV3Q8IVL0 2385 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 URADA6NGE7 173 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 E9PLN8 166 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 H0YGG7 62 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 FOXE1O00358 373 aaPredicted RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 SAP18O00422 153 aaKnown RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 PEX11AO75192 247 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 SEC22BO75396 215 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 CLEC3AO75596 197 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 FAM107AO95990 144 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 F10P00742 488 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 JUNP05412 331 aaKnown RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 HSD3B1P14060 373 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 HOXB4P17483 251 aaPredicted RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 PTX3P26022 381 aaPredicted RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 HSD3B2P26439 372 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 EPHA3P29320 983 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 IDH3AP50213 366 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 ARF3P61204 181 aaPredicted RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 EEF1A2Q05639 463 aaKnown RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 GKAP1Q5VSY0 366 aaPredicted RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 FRMPD2BQ6IN97 320 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 ADNP2Q6IQ32 1131 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 CGB2Q6NT52 195 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 EPGNQ6UW88 154 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 CSNK1A1LQ8N752 337 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 PPP3R2Q96LZ3 170 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 MACROD1Q9BQ69 325 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 VKORC1Q9BQB6 163 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 RHBGQ9H310 441 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 OR51B5Q9H339 312 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 BRF2Q9HAW0 419 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 MKKSQ9NPJ1 570 aaPredicted RBP12.79□□□□□ -0.36
SEC13-205ENST00000397101 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 VPS29Q9UBQ0 182 aa12.79□□□□□ -0.36
SEC13-205ENST00000397101 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 LOC102723532A0A0G2JNH3 316 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 SDHDO14521 159 aa12.78□□□□□ -0.36
SEC13-205ENST00000397101 TXNDC9O14530 226 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms