RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 WNT16Q9UBV4 365 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 A8MUA0 341 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 SERPINI2O75830 405 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 SNAP29O95721 258 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 ST13P50502 369 aaKnown RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 INAVAQ3KP66 663 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 SPNS1Q9H2V7 528 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 Q9N2J8 555 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 LRIT2A6NDA9 550 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 CLK3P49761 638 aaKnown RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 TARDBPQ13148 414 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATN1-202ENST00000396684 DYNC1I2Q13409 638 aaKnown RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 ZNF267Q14586 743 aaPredicted RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 LRIF1Q5T3J3 769 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATN1-202ENST00000396684 TM4SF18Q96CE8 201 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 FBXL20Q96IG2 436 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 BMFQ96LC9 184 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 STARD5Q9NSY2 213 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 PLCL2Q9UPR0 1127 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 SPTY2D1-AS1A0A0U1RR47 76 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 FAM47E-STBD1D6RA91 191 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 IL9P15248 144 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 IST1P53990 364 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 KIAA1614Q5VZ46 1190 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 RBM44Q6ZP01 1051 aaKnown RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 CARM1Q86X55 608 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 PEX11GQ96HA9 241 aa11.29□□□□□ -0.6
ATN1-202ENST00000396684 CDX2Q99626 313 aaPredicted RBP11.29□□□□□ -0.6
ATN1-202ENST00000396684 TTC36A6NLP5 189 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 H3BNX3 289 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 AIFM1O95831 613 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 CLIC3O95833 236 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 HOXC4P09017 264 aaPredicted RBP11.28□□□□□ -0.6
ATN1-202ENST00000396684 MYL12AP19105 171 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 LTBRP36941 435 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 MC3RP41968 323 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 PSMD4P55036 377 aaKnown RBP11.28□□□□□ -0.6
ATN1-202ENST00000396684 WASH2PQ6VEQ5 465 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 TTLL10Q6ZVT0 673 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 Q7L0L9 218 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 GALNT12Q8IXK2 581 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 OR9A2Q8NGT5 310 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 SUN3Q8TAQ9 357 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 HMGCLL1Q8TB92 370 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 PIGXQ8TBF5 258 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 PTCHD1Q96NR3 888 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 DACH2Q96NX9 599 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ALPK1Q96QP1 1244 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 POLR2J3Q9H1A7 115 aaKnown RBP11.28□□□□□ -0.6
ATN1-202ENST00000396684 SH2B3Q9UQQ2 575 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 POFUT2Q9Y2G5 429 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 PRAMEF33A0A0G2JMD5 474 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 RDH16O75452 317 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 KLHL18O94889 574 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ITPKBP27987 946 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 HYAL2Q12891 473 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 DOK4Q8TEW6 326 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 NAALAD2Q9Y3Q0 740 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ZNF451Q9Y4E5 1061 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 MYO10Q9HD67 2058 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ANKRD36A6QL64 1941 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 LOC100130705A0A1B0GUX0 176 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 SPINT1O43278 529 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 HPRP00739 348 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 GPX2P18283 190 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 TPP2P29144 1249 aaPredicted RBP11.28□□□□□ -0.6
ATN1-202ENST00000396684 MRPL19P49406 292 aaKnown RBP11.28□□□□□ -0.6
ATN1-202ENST00000396684 KCNAB2Q13303 367 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 AGERQ15109 404 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 KBTBD2Q8IY47 623 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ZZZ3Q8IYH5 903 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 LILRA2Q8N149 483 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 MARVELD2Q8N4S9 558 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 FCRL4Q96PJ5 515 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 RHCGQ9UBD6 479 aa11.28□□□□□ -0.6
ATN1-202ENST00000396684 A0A0A6YYC8 382 aaPredicted RBP11.27□□□□□ -0.6
ATN1-202ENST00000396684 METTL12A8MUP2 240 aa11.27□□□□□ -0.6
ATN1-202ENST00000396684 I3L1I5 382 aaPredicted RBP11.27□□□□□ -0.6
ATN1-202ENST00000396684 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.6
ATN1-202ENST00000396684 ZBTB11O95625 1053 aaPredicted RBP11.27□□□□□ -0.6
ATN1-202ENST00000396684 HMGN2P05204 90 aaKnown RBP11.27□□□□□ -0.6
ATN1-202ENST00000396684 NUDT7P0C024 238 aa11.27□□□□□ -0.6
ATN1-202ENST00000396684 PTGER1P34995 402 aa11.27□□□□□ -0.6
ATN1-202ENST00000396684 TSFMP43897 325 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms