RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CLCA3PQ9Y6N3 262 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 DOCK10Q96BY6 2186 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 IGSF10Q6WRI0 2623 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 ERAL1O75616 437 aaKnown RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 SLC35E2P0CK97 266 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 COX7A2P14406 83 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 DDCP20711 480 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 EMX2Q04743 252 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 MAD2L1Q13257 205 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 RAPSNQ13702 412 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 SMU1Q2TAY7 513 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 IL23RQ5VWK5 629 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 RGS9BPQ6ZS82 235 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 ST13P4Q8IZP2 240 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 EXD3Q8N9H8 876 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 NFAM1Q8NET5 270 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 FDCSPQ8NFU4 85 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 OR14A16Q8NHC5 309 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 PTPMT1Q8WUK0 201 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 DAZLQ92904 295 aaKnown RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 PPWD1Q96BP3 646 aaKnown RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 WBP1Q96G27 269 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 EGLN2Q96KS0 407 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 TSSK3Q96PN8 268 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 UBL7Q96S82 380 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 PELOQ9BRX2 385 aaKnown RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 SLC25A23Q9BV35 468 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 BAIAP2L1Q9UHR4 511 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 TUBD1Q9UJT1 453 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 UTS2RQ9UKP6 389 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 EIF3LQ9Y262 564 aaKnown RBP17.94■□□□□ 0.46
HOXA9-202ENST00000396345 ZFYVE26Q68DK2 2539 aa17.94■□□□□ 0.46
HOXA9-202ENST00000396345 CROCCQ5TZA2 2017 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 C17orf105B2RV13 164 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 SDHDO14521 159 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 OR10H2O60403 315 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 KLHL41O60662 606 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 ITGAMP11215 1152 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 CPMP14384 443 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 PORP16435 677 aaPredicted RBP17.93■□□□□ 0.46
HOXA9-202ENST00000396345 ASMTP46597 345 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 MYBPC3Q14896 1274 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 JMJD6Q6NYC1 403 aaPredicted RBP17.93■□□□□ 0.46
HOXA9-202ENST00000396345 PCSK4Q6UW60 755 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 FAM47EQ6ZV65 393 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 LIX1Q8N485 282 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 B3GNT7Q8NFL0 401 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 CLHC1Q8NHS4 586 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 EXOSC8Q96B26 276 aaKnown RBP17.93■□□□□ 0.46
HOXA9-202ENST00000396345 ABHD17AQ96GS6 310 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 NUDT9Q9BW91 350 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 MMP25Q9NPA2 562 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 GPR83Q9NYM4 423 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 EHD3Q9NZN3 535 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 PCDHGA9Q9Y5G4 932 aaKnown RBP17.93■□□□□ 0.46
HOXA9-202ENST00000396345 ZNF780BQ9Y6R6 833 aa17.93■□□□□ 0.46
HOXA9-202ENST00000396345 ATMQ13315 3056 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 A0A1W2PS29 197 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 DYRK3O43781 588 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 LRATO95237 230 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 PRPS2P11908 318 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 LBPP18428 481 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 CSNK2A2P19784 350 aaPredicted RBP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 FEN1P39748 380 aaKnown RBP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 ERVK-8P63133 956 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 ZNF750Q32MQ0 723 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 VWA5B1Q5TIE3 1220 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 LARP4Q71RC2 724 aaKnown RBP eCLIP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 TICAM1Q8IUC6 712 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 LRRC34Q8IZ02 419 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 MORN4Q8NDC4 146 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 BRIX1Q8TDN6 353 aaKnown RBP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 GFM2Q969S9 779 aaKnown RBP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 KCNK13Q9HB14 408 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 MIEF1Q9NQG6 463 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 GIMAP4Q9NUV9 329 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 PPIEQ9UNP9 301 aaKnown RBP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 EXO1Q9UQ84 846 aaKnown RBP17.92■□□□□ 0.46
HOXA9-202ENST00000396345 USH1CQ9Y6N9 552 aa17.92■□□□□ 0.46
HOXA9-202ENST00000396345 GOLGA8QA0A0J9YX86 632 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 GOLGA8OA6NCC3 632 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 TCP11X1B4DZS4 312 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 GOLGA8NF8WBI6 632 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 ZNF195O14628 629 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 AKAP10O43572 662 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 EPHA3P29320 983 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 GALNSP34059 522 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 PGDP52209 483 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 LY6DQ14210 128 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 AGAP7PQ5VUJ5 663 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 FAM180BQ6P0A1 224 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 DGAT2L6Q6ZPD8 337 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 MAVSQ7Z434 540 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 SAMD14Q8IZD0 417 aaPredicted RBP17.91■□□□□ 0.46
HOXA9-202ENST00000396345 C9orf43Q8TAL5 461 aaPredicted RBP17.91■□□□□ 0.46
HOXA9-202ENST00000396345 ELP5Q8TE02 316 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 RIT1Q92963 219 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 NCLNQ969V3 563 aa17.91■□□□□ 0.46
HOXA9-202ENST00000396345 CNRIP1Q96F85 164 aaPredicted RBP17.91■□□□□ 0.46
HOXA9-202ENST00000396345 VMP1Q96GC9 406 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms