RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ADNP2Q6IQ32 1131 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 TRILQ7L0X0 811 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 PAGE2Q7Z2X7 111 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 CMC1Q7Z7K0 106 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 ISCA2Q86U28 154 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 NUDT13Q86X67 352 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 CCDC71Q8IV32 467 aaPredicted RBP15.14■□□□□ 0.01
DDR1-229ENST00000396342 ZCCHC7Q8N3Z6 543 aaKnown RBP15.14■□□□□ 0.01
DDR1-229ENST00000396342 TMEM251Q8N6I4 163 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
DDR1-229ENST00000396342 SPACA9Q96E40 222 aaPredicted RBP15.14■□□□□ 0.01
DDR1-229ENST00000396342 DTNBP1Q96EV8 351 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 TSPYL1Q9H0U9 437 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 PNPLA3Q9NST1 481 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 TMCO1Q9UM00 188 aa15.14■□□□□ 0.01
DDR1-229ENST00000396342 NKX2-6A6NCS4 301 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 FGF17O60258 216 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 WISP3O95389 354 aaPredicted RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 ETHE1O95571 254 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 GPR75O95800 540 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 IGHG3P01860 377 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 SLC35E2BP0CK96 405 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 CD1EP15812 388 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 PIK3R1P27986 724 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 DNASE1L1P49184 302 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 SERPINB8P50452 374 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 PCDH1Q08174 1060 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 C2orf54Q08AI8 447 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 CDSNQ15517 529 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 CPSF6Q16630 551 aaKnown RBP eCLIP15.13■□□□□ 0.01
DDR1-229ENST00000396342 C10orf62Q5T681 223 aaPredicted RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 C1orf185Q5T7R7 199 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 MROH9Q5TGP6 573 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 METTL2BQ6P1Q9 378 aaKnown RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 ZNF793Q6ZN11 406 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 UBE3DQ7Z6J8 389 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 FBXW8Q8N3Y1 598 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 ZNF721Q8TF20 911 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 ANKRD9Q96BM1 317 aaPredicted RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 PPWD1Q96BP3 646 aaKnown RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 NXNL1Q96CM4 212 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 SERPINI1Q99574 410 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 DOHHQ9BU89 302 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 ZFP64Q9NPA5 681 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 DMRT3Q9NQL9 472 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 NMRK1Q9NWW6 199 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 QPCTLQ9NXS2 382 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 CPSF2Q9P2I0 782 aaKnown RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 MTRF1LQ9UGC7 380 aaKnown RBP15.13■□□□□ 0.01
DDR1-229ENST00000396342 TSC22D4Q9Y3Q8 395 aa15.13■□□□□ 0.01
DDR1-229ENST00000396342 TMEM200CA6NKL6 621 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 HSPB2A8KAH6 182 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 TP73O15350 636 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 SMIM24O75264 130 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 GLSO94925 669 aaPredicted RBP15.12■□□□□ 0.01
DDR1-229ENST00000396342 CLDN9O95484 217 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 FAM58BPP0C7Q3 252 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 MSX1P28360 303 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 DEKP35659 375 aaKnown RBP15.12■□□□□ 0.01
DDR1-229ENST00000396342 MASP1P48740 699 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 CCNG1P51959 295 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 HERVK_113P63132 956 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 ERVK-8P63133 956 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 CUL3Q13618 768 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 SETDB1Q15047 1291 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 HSPB2Q16082 182 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 HYAL4Q2M3T9 481 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 OR52E8Q6IFG1 317 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 PACS2Q86VP3 889 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 ZNF321PQ8N8H1 164 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 KCTD4Q8WVF5 259 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 ZNF597Q96LX8 424 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 ATOH8Q96SQ7 321 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 TTYH2Q9BSA4 534 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 ERVK-6Q9BXR3 956 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 UCK2Q9BZX2 261 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 VPS11Q9H270 941 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 IPPKQ9H8X2 491 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 SNX15Q9NRS6 342 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 TUBA8Q9NY65 449 aaPredicted RBP15.12■□□□□ 0.01
DDR1-229ENST00000396342 ERVK-19Q9WJR5 959 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 ATG4BQ9Y4P1 393 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 CLDN16Q9Y5I7 305 aa15.12■□□□□ 0.01
DDR1-229ENST00000396342 CRYBG3Q68DQ2 2970 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 A0A096LPK6 155 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 A0A1B0GVC2 190 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 C2orf92A0A1B0GVN3 265 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 H0YIV9 168 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 PRAMEF4O60810 478 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 CDH16O75309 829 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 FAM155BO75949 473 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 TBX6O95947 436 aaPredicted RBP15.11■□□□□ 0.01
DDR1-229ENST00000396342 INHBAP08476 426 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 RBP1P09455 135 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 CCL3P10147 92 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 GDF1P27539 372 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 GALNSP34059 522 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 PIGAP37287 484 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 GPX6P59796 221 aa15.11■□□□□ 0.01
DDR1-229ENST00000396342 RPS13P62277 151 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms